RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 Q9UFV3 132 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 RWDD2AQ9UIY3 292 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 KCNJ14Q9UNX9 436 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 SCAF8Q9UPN6 1271 aaKnown RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 PCDHB6Q9Y5E3 794 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 MUC3AQ02505 3323 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 AKR1B15C9JRZ8 316 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 DVL2O14641 736 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 KIF5CO60282 957 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 ATP1A3P13637 1013 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 GNA11P29992 359 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 NFKB2Q00653 900 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 AMPD3Q01432 767 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 MECOMQ03112 1051 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 PPIL2Q13356 520 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 MOGSQ13724 837 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 VGLL4Q14135 290 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 KCNB1Q14721 858 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 GRM4Q14833 912 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 ZNF658Q5TYW1 1059 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 LIMS2Q7Z4I7 341 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 KIAA0907Q7Z7F0 614 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 ANKRD23Q86SG2 305 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 ADGRA1Q86SQ6 560 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 LRRTM3Q86VH5 581 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 TMTC1Q8IUR5 882 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 FOXP4Q8IVH2 680 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 ZNF444Q8N0Y2 327 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 KIAA1958Q8N8K9 716 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 MNS1Q8NEH6 495 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 TBC1D22AQ8WUA7 517 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 ERCC4Q92889 916 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 DHX58Q96C10 678 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 PAWRQ96IZ0 340 aaKnown RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 LOXL4Q96JB6 756 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 SNX27Q96L92 541 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 DEFB118Q96PH6 123 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 CDX2Q99626 313 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 CCSER1Q9C0I3 900 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 TRMT1Q9NXH9 659 aaKnown RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 ZNF215Q9UL58 517 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-217ENST00000567817 PPP2R2CQ9Y2T4 447 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 OTOFQ9HC10 1997 aa5.82□□□□□ -1.48
CAPN3-217ENST00000567817 CCDC194A0A1B0GVG4 234 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 ESYT2A0FGR8 921 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 BICDL2A1A5D9 508 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 USP27XA6NNY8 438 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 BTBD19C9JJ37 291 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 GPR42O15529 346 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 SLC26A4O43511 780 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 KIF20AO95235 890 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 PRLP01236 227 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 EEF1GP26641 437 aaKnown RBP5.81□□□□□ -1.48
CAPN3-217ENST00000567817 CASQ1P31415 396 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 KCNQ1P51787 676 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 RRADP55042 308 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 ADAM17P78536 824 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 ROM1Q03395 351 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 PRKCZQ05513 592 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 CUL4BQ13620 913 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 EPHA7Q15375 998 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 C12orf60Q5U649 245 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 FOXR2Q6PJQ5 311 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 SYT10Q6XYQ8 523 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 FAM114A1Q8IWE2 563 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 BLIDQ8IZY5 108 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 KRT222Q8N1A0 295 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 PPM1KQ8N3J5 372 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 CEP112Q8N8E3 955 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 TC2NQ8N9U0 490 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 ATXN2LQ8WWM7 1075 aaKnown RBP5.81□□□□□ -1.48
CAPN3-217ENST00000567817 MFSD3Q96ES6 412 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 BORCS6Q96GS4 357 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 NAP1L4Q99733 375 aaKnown RBP5.81□□□□□ -1.48
CAPN3-217ENST00000567817 NUP58Q9BVL2 599 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 SPZ1Q9BXG8 430 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 LRRC27Q9C0I9 530 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 C11orf49Q9H6J7 331 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 MSL2Q9HCI7 577 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 ZNHIT6Q9NWK9 470 aaKnown RBP5.81□□□□□ -1.48
CAPN3-217ENST00000567817 MCM9Q9NXL9 1143 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 ADD3Q9UEY8 706 aaKnown RBP5.81□□□□□ -1.48
CAPN3-217ENST00000567817 LIMA1Q9UHB6 759 aaKnown RBP5.81□□□□□ -1.48
CAPN3-217ENST00000567817 ZMYND8Q9ULU4 1186 aaPredicted RBP5.81□□□□□ -1.48
CAPN3-217ENST00000567817 SPO11Q9Y5K1 396 aa5.81□□□□□ -1.48
CAPN3-217ENST00000567817 MAST2Q6P0Q8 1798 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 UBA6A0AVT1 1052 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 VWA3AA6NCI4 1184 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 PSMA7O14818 248 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 KPNA6O60684 536 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 GAS7O60861 476 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 MFAP3LO75121 409 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 PLEKHA8P1O95397 391 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 FGFR1OPO95684 399 aaKnown RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 TSPY3P0CV98 308 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 TSPY8P0CW00 308 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 FOSL2P15408 326 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 H2AFXP16104 143 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 PBX1P40424 430 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms