RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZNF91Q05481 1191 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 SRSF1Q07955 248 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMG1-212ENST00000566328 NOGQ13253 232 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 LEXMQ3ZCV2 418 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 EFCAB2Q5VUJ9 269 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 DEF8Q6ZN54 512 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 HEATR3Q7Z4Q2 680 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 ADHFE1Q8IWW8 467 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 KRT78Q8N1N4 520 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 MIER2Q8N344 545 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 CBARPQ8N350 705 aaPredicted RBP3.01□□□□□ -1.93
SMG1-212ENST00000566328 SIRT6Q8N6T7 355 aa3.01□□□□□ -1.93
SMG1-212ENST00000566328 OSR1Q8TAX0 266 aaPredicted RBP3.01□□□□□ -1.93
SMG1-212ENST00000566328 TRMT13Q9NUP7 481 aaKnown RBP3.01□□□□□ -1.93
SMG1-212ENST00000566328 NDRG4Q9ULP0 352 aaKnown RBP3.01□□□□□ -1.93
SMG1-212ENST00000566328 SHTN1A0MZ66 631 aa3□□□□□ -1.93
SMG1-212ENST00000566328 LRRC14BA6NHZ5 514 aa3□□□□□ -1.93
SMG1-212ENST00000566328 SMAD6O43541 496 aaKnown RBP3□□□□□ -1.93
SMG1-212ENST00000566328 KRT86O43790 486 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PCDHGA12O60330 932 aa3□□□□□ -1.93
SMG1-212ENST00000566328 MYBL2P10244 700 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PSG1P11464 419 aa3□□□□□ -1.93
SMG1-212ENST00000566328 HOXD9P28356 352 aaPredicted RBP3□□□□□ -1.93
SMG1-212ENST00000566328 VIPR2P41587 438 aa3□□□□□ -1.93
SMG1-212ENST00000566328 HTR6P50406 440 aa3□□□□□ -1.93
SMG1-212ENST00000566328 HK3P52790 923 aa3□□□□□ -1.93
SMG1-212ENST00000566328 HYAL1Q12794 435 aa3□□□□□ -1.93
SMG1-212ENST00000566328 KRT81Q14533 505 aa3□□□□□ -1.93
SMG1-212ENST00000566328 SYDE2Q5VT97 1194 aa3□□□□□ -1.93
SMG1-212ENST00000566328 DAB2IPQ5VWQ8 1189 aa3□□□□□ -1.93
SMG1-212ENST00000566328 DENND2CQ68D51 928 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PNMA8AQ86V59 439 aaPredicted RBP3□□□□□ -1.93
SMG1-212ENST00000566328 ANKRD13BQ86YJ7 626 aa3□□□□□ -1.93
SMG1-212ENST00000566328 SFTPA1Q8IWL2 248 aa3□□□□□ -1.93
SMG1-212ENST00000566328 SLC15A3Q8IY34 581 aa3□□□□□ -1.93
SMG1-212ENST00000566328 ARFGAP1Q8N6T3 406 aa3□□□□□ -1.93
SMG1-212ENST00000566328 GADD45GIP1Q8TAE8 222 aaPredicted RBP3□□□□□ -1.93
SMG1-212ENST00000566328 ZNF398Q8TD17 642 aa3□□□□□ -1.93
SMG1-212ENST00000566328 BRIX1Q8TDN6 353 aaKnown RBP3□□□□□ -1.93
SMG1-212ENST00000566328 OSCP1Q8WVF1 389 aa3□□□□□ -1.93
SMG1-212ENST00000566328 RSPRY1Q96DX4 576 aa3□□□□□ -1.93
SMG1-212ENST00000566328 SERPINB13Q9UIV8 391 aa3□□□□□ -1.93
SMG1-212ENST00000566328 AMFRQ9UKV5 643 aa3□□□□□ -1.93
SMG1-212ENST00000566328 MAFFQ9ULX9 164 aa3□□□□□ -1.93
SMG1-212ENST00000566328 TMA7Q9Y2S6 64 aaKnown RBP3□□□□□ -1.93
SMG1-212ENST00000566328 PRKAB1Q9Y478 270 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PLEKHM1Q9Y4G2 1056 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PCDHGA9Q9Y5G4 932 aaKnown RBP3□□□□□ -1.93
SMG1-212ENST00000566328 PCDHGA8Q9Y5G5 932 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PCDHGA7Q9Y5G6 932 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PCDHGA6Q9Y5G7 932 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PCDHGA3Q9Y5H0 932 aa3□□□□□ -1.93
SMG1-212ENST00000566328 HS3ST3B1Q9Y662 390 aa3□□□□□ -1.93
SMG1-212ENST00000566328 PSMD9O00233 223 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 TLR2O60603 784 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 CYP2C9P11712 490 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 XRCC6P12956 609 aaKnown RBP eCLIP2.99□□□□□ -1.93
SMG1-212ENST00000566328 TYRP14679 529 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 CDKN2AP42771 156 aaKnown RBP2.99□□□□□ -1.93
SMG1-212ENST00000566328 E2F1Q01094 437 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 KRTAP27-1Q3LI81 207 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 DEPDC1Q5TB30 811 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 EMC10Q5UCC4 262 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 BCDIN3DQ7Z5W3 292 aaKnown RBP2.99□□□□□ -1.93
SMG1-212ENST00000566328 CAND1Q86VP6 1230 aaKnown RBP2.99□□□□□ -1.93
SMG1-212ENST00000566328 PPP1R3BQ86XI6 285 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 MPLKIPQ8TAP9 179 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 CTAGE1Q96RT6 745 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 TRMOQ9BU70 441 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 LMBRD1Q9NUN5 540 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 PROCRQ9UNN8 238 aa2.99□□□□□ -1.93
SMG1-212ENST00000566328 B4DGG1 531 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 MYO1CO00159 1063 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 AP4M1O00189 453 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 TOMM40O96008 361 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 MT-CO3P00414 261 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 AHSGP02765 367 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 FTLP02792 175 aaPredicted RBP2.98□□□□□ -1.93
SMG1-212ENST00000566328 GRPP07492 148 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 SUMO2P61956 95 aaKnown RBP2.98□□□□□ -1.93
SMG1-212ENST00000566328 RPS13P62277 151 aaKnown RBP2.98□□□□□ -1.93
SMG1-212ENST00000566328 RNASE12Q5GAN4 147 aaKnown RBP2.98□□□□□ -1.93
SMG1-212ENST00000566328 UBAP2Q5T6F2 1119 aaKnown RBP2.98□□□□□ -1.93
SMG1-212ENST00000566328 COLCA1Q6ZS62 124 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 Q6ZTC4 211 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 C18orf65Q6ZTR6 163 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 PIP4P1Q86T03 277 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 LIX1LQ8IVB5 337 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 IZUMO1Q8IYV9 350 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 ZBTB8BQ8NAP8 495 aaPredicted RBP2.98□□□□□ -1.93
SMG1-212ENST00000566328 PCSK9Q8NBP7 692 aaKnown RBP2.98□□□□□ -1.93
SMG1-212ENST00000566328 MAP4K1Q92918 833 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 ZFYVE19Q96K21 471 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 MMS19Q96T76 1030 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 FAM234AQ9H0X4 552 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 TMEM184CQ9NVA4 438 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 PNPOQ9NVS9 261 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 HEY2Q9UBP5 337 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 ICKQ9UPZ9 632 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms