RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 M0QYV0 167 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 TNFRSF10BO14763 440 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 CSH1P0DML2 217 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 CSH2P0DML3 217 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 HMGA1P17096 107 aaKnown RBP17.61■□□□□ 0.41
RNF40-207ENST00000565931 PTPN2P17706 415 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 CASP14P31944 242 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 ARID5AQ03989 594 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 BST2Q10589 180 aaKnown RBP17.61■□□□□ 0.41
RNF40-207ENST00000565931 TBX2Q13207 712 aaPredicted RBP17.61■□□□□ 0.41
RNF40-207ENST00000565931 MTMR3Q13615 1198 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 ATAT1Q5SQI0 421 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 SFMBT2Q5VUG0 894 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 E4F1Q66K89 784 aaPredicted RBP17.61■□□□□ 0.41
RNF40-207ENST00000565931 TMC6Q7Z403 805 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 GRASPQ7Z6J2 395 aaPredicted RBP17.61■□□□□ 0.41
RNF40-207ENST00000565931 FMNL3Q8IVF7 1028 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 HS6ST3Q8IZP7 471 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 ELMOD1Q8N336 334 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 STKLD1Q8NE28 680 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 ZNF397Q8NF99 534 aaPredicted RBP17.61■□□□□ 0.41
RNF40-207ENST00000565931 SUSD6Q92537 303 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 LRRC3Q9BY71 257 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 PNPLA8Q9NP80 782 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 HCFC1R1Q9NWW0 138 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 PCDHGC3Q9UN70 934 aa17.61■□□□□ 0.41
RNF40-207ENST00000565931 LUC7L2Q9Y383 392 aaKnown RBP17.61■□□□□ 0.41
RNF40-207ENST00000565931 GOLGA6L3A6NEY3 463 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 GRXCR2A6NFK2 248 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 TULP2O00295 520 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 XPO1O14980 1071 aaKnown RBP17.6■□□□□ 0.41
RNF40-207ENST00000565931 MBTPS2O43462 519 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 ADCY5O95622 1261 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 CCDC172P0C7W6 258 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 SETSIPP0DME0 302 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 KRT9P35527 623 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 MTHFRP42898 656 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 GPD2P43304 727 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 PDE6CP51160 858 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 EPHA5P54756 1037 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 SLC8A3P57103 927 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 NTHL1P78549 312 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 SMAD4Q13485 552 aaKnown RBP17.6■□□□□ 0.41
RNF40-207ENST00000565931 ASIC2Q16515 512 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 TAF3Q5VWG9 929 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 DENND5BQ6ZUT9 1274 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 PIGZQ86VD9 579 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 TMC8Q8IU68 726 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 NUP93Q8N1F7 819 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.6■□□□□ 0.41
RNF40-207ENST00000565931 SLC35F5Q8WV83 523 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 SECISBP2LQ93073 1101 aaKnown RBP17.6■□□□□ 0.41
RNF40-207ENST00000565931 MYRFLQ96LU7 910 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 CORO1BQ9BR76 489 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 NUCKS1Q9H1E3 243 aaKnown RBP17.6■□□□□ 0.41
RNF40-207ENST00000565931 GRPEL1Q9HAV7 217 aa17.6■□□□□ 0.41
RNF40-207ENST00000565931 USP15Q9Y4E8 981 aaPredicted RBP17.6■□□□□ 0.41
RNF40-207ENST00000565931 RHOP08100 348 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 CHRNB2P17787 502 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 PRKCIP41743 596 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 PLA2G4AP47712 749 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 SLC5A3P53794 718 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 USP46P62068 366 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 CDR2Q01850 454 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 TFF2Q03403 129 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 TAF12Q16514 161 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 GPRIN1Q7Z2K8 1008 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 ZNF677Q86XU0 584 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 WDTC1Q8N5D0 677 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 SLC20A1Q8WUM9 679 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 SYN2Q92777 582 aaPredicted RBP17.59■□□□□ 0.41
RNF40-207ENST00000565931 RIPOR3Q96MK2 946 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 TTLL2Q9BWV7 592 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 IL21Q9HBE4 155 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 ZNF334Q9HCZ1 680 aaPredicted RBP17.59■□□□□ 0.41
RNF40-207ENST00000565931 WDR6Q9NNW5 1121 aaKnown RBP17.59■□□□□ 0.41
RNF40-207ENST00000565931 AVENQ9NQS1 362 aaPredicted RBP17.59■□□□□ 0.41
RNF40-207ENST00000565931 COMMD8Q9NX08 183 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 IL37Q9NZH6 218 aa17.59■□□□□ 0.41
RNF40-207ENST00000565931 MMEP08473 750 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 KIF11P52732 1056 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 FMO1Q01740 532 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 PABPC1LQ4VXU2 614 aaKnown RBP17.58■□□□□ 0.4
RNF40-207ENST00000565931 PMF1Q6P1K2 205 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 LEMD2Q8NC56 503 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 SCAMP5Q8TAC9 235 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 STK32AQ8WU08 396 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 KCTD13Q8WZ19 329 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 TRMT2BQ96GJ1 504 aaKnown RBP17.58■□□□□ 0.4
RNF40-207ENST00000565931 HSFY1Q96LI6 401 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 NECTIN4Q96NY8 510 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 SYT11Q9BT88 431 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 PDCL3Q9H2J4 239 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 ASAH2Q9NR71 780 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 THEGQ9P2T0 379 aa17.58■□□□□ 0.4
RNF40-207ENST00000565931 MAGED2Q9UNF1 606 aaPredicted RBP17.58■□□□□ 0.4
RNF40-207ENST00000565931 MOSPD3O75425 235 aa17.57■□□□□ 0.4
RNF40-207ENST00000565931 GABBR2O75899 941 aa17.57■□□□□ 0.4
RNF40-207ENST00000565931 RTN3O95197 1032 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms