RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 AP3M2P53677 418 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 CDH8P55286 799 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 FAM160A1Q05DH4 1040 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 RUNX3Q13761 415 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 LRRC32Q14392 662 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 MTF1Q14872 753 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 ZACNQ401N2 412 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 C1orf220Q5T0J3 134 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 CEP135Q66GS9 1140 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 NAIF1Q69YI7 327 aaPredicted RBP10.69□□□□□ -0.7
CMTM3-209ENST00000565003 SV2AQ7L0J3 742 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 SPEM1Q8N4L4 309 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 ARL14EPQ8N8R7 260 aaPredicted RBP10.69□□□□□ -0.7
CMTM3-209ENST00000565003 TTC16Q8NEE8 873 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 ATRIPQ8WXE1 791 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 C8orf48Q96LL4 319 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 CEP295NLQ96MC4 621 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 TTLL2Q9BWV7 592 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 B3GNT5Q9BYG0 378 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 SDCBP2Q9H190 292 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 EPC1Q9H2F5 836 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 CALUO43852 315 aaPredicted RBP10.68□□□□□ -0.7
CMTM3-209ENST00000565003 AKAP3O75969 853 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 ZNF202O95125 648 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 NR2F2P24468 414 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 HOXC13P31276 330 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 CXCL12P48061 93 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 NOP14P78316 857 aaKnown RBP10.68□□□□□ -0.7
CMTM3-209ENST00000565003 ZXDBP98169 803 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 DMWDQ09019 674 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 KCNB1Q14721 858 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 ZNF667Q5HYK9 610 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 TMEM196Q5HYL7 178 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 DGKKQ5KSL6 1271 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 SPOPLQ6IQ16 392 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 FSTL4Q6MZW2 842 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 CC2D1AQ6P1N0 951 aaPredicted RBP10.68□□□□□ -0.7
CMTM3-209ENST00000565003 FAM35AQ86V20 835 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 DCLK2Q8N568 766 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 SH3RF2Q8TEC5 729 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 RUBCNQ92622 972 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 HINFPQ9BQA5 517 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 FAM126AQ9BYI3 521 aaPredicted RBP10.68□□□□□ -0.7
CMTM3-209ENST00000565003 ELOVL4Q9GZR5 314 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 SMG5Q9UPR3 1016 aaKnown RBP10.68□□□□□ -0.7
CMTM3-209ENST00000565003 FRMD4BQ9Y2L6 1034 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 WNT6Q9Y6F9 365 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 HELZP42694 1942 aaKnown RBP10.68□□□□□ -0.7
CMTM3-209ENST00000565003 SPTBN4Q9H254 2564 aa10.68□□□□□ -0.7
CMTM3-209ENST00000565003 ZNF840PA6NDX5 716 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 K7ESF4 209 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 TRDMT1O14717 391 aaKnown RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 IKBKBO14920 756 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 MAPK13O15264 365 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 PAPSS2O95340 614 aaPredicted RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 OLFM2O95897 454 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 ASS1P00966 412 aaKnown RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 TRIM49P0CI25 452 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 TRIM49CP0CI26 452 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 HDCP19113 662 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 GJA4P35212 333 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 PIK3CAP42336 1068 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 ASPAP45381 313 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 VAMP7P51809 220 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 C1QBPQ07021 282 aaKnown RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 IFRD2Q12894 506 aaPredicted RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 TAF10Q12962 218 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 ORC1Q13415 861 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 PPP2R5DQ14738 602 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 PDGFRLQ15198 375 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 NFIL3Q16649 462 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 ZCWPW2Q504Y3 356 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 PKN3Q6P5Z2 889 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 PAQR9Q6ZVX9 377 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 SMYD4Q8IYR2 804 aaPredicted RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 GUF1Q8N442 669 aaKnown RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 OSCP1Q8WVF1 389 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 CCDC47Q96A33 483 aaKnown RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 KCNK16Q96T55 309 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 RNF38Q9H0F5 515 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 ECT2Q9H8V3 914 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 FBRSL1Q9HCM7 1045 aaKnown RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 DUS2Q9NX74 493 aaKnown RBP10.67□□□□□ -0.7
CMTM3-209ENST00000565003 TRPM5Q9NZQ8 1165 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 HMGXB4Q9UGU5 601 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 ARHGAP26Q9UNA1 814 aa10.67□□□□□ -0.7
CMTM3-209ENST00000565003 CHURC1-FNTBB4DL54 471 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 LEFTY2O00292 366 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 KIF20AO95235 890 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 OAS1P00973 400 aaKnown RBP10.66□□□□□ -0.7
CMTM3-209ENST00000565003 EGFP01133 1207 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 HLA-DRAP01903 254 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 CCDC130P13994 396 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 TCF3P15923 654 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 PFKLP17858 780 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 GCLMP48507 274 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 FNTBP49356 437 aa10.66□□□□□ -0.7
CMTM3-209ENST00000565003 NDST1P52848 882 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms