RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 ATP8B3O60423 1300 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 WDR87Q6ZQQ6 2873 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 PRR5-ARHGAP8B1AHC4 643 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 K7ESF4 209 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 RPN1P04843 607 aaKnown RBP15.99■□□□□ 0.15
SPG7-210ENST00000564409 P4HA1P13674 534 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 PFKFB1P16118 471 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 IFNAR2P48551 515 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 MYL6P60660 151 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 ARHGAP8P85298 464 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 STK4Q13043 487 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 ZNF667Q5HYK9 610 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 MDH1BQ5I0G3 518 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 WDR44Q5JSH3 913 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 B3GALNT2Q8NCR0 500 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 TAF4BQ92750 862 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 TNIP3Q96KP6 325 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 SCAND2PQ9GZW5 306 aaPredicted RBP15.99■□□□□ 0.15
SPG7-210ENST00000564409 GZF1Q9H116 711 aaPredicted RBP15.99■□□□□ 0.15
SPG7-210ENST00000564409 HPSEQ9Y251 543 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 ATG2BQ96BY7 2078 aa15.99■□□□□ 0.15
SPG7-210ENST00000564409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.98■□□□□ 0.15
SPG7-210ENST00000564409 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 A8MXQ7 604 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 CHURC1-FNTBB4DL54 471 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 IKBKBO14920 756 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 FOXD2O60548 495 aaPredicted RBP15.98■□□□□ 0.15
SPG7-210ENST00000564409 RTN3O95197 1032 aaPredicted RBP15.98■□□□□ 0.15
SPG7-210ENST00000564409 LMNB2Q03252 620 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 BIRC3Q13489 604 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 CCDC142Q17RM4 750 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 SGSM1Q2NKQ1 1148 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 ZNF699Q32M78 642 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 KMT5BQ4FZB7 885 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 TDRD10Q5VZ19 366 aaKnown RBP15.98■□□□□ 0.15
SPG7-210ENST00000564409 FSTL4Q6MZW2 842 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 Q6ZS52 159 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 GRAMD1CQ8IYS0 662 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 ARL14EPQ8N8R7 260 aaPredicted RBP15.98■□□□□ 0.15
SPG7-210ENST00000564409 KIAA0895Q8NCT3 520 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 STKLD1Q8NE28 680 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 TMC2Q8TDI7 906 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 RMDN1Q96DB5 314 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 SLITRK1Q96PX8 696 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 SLC22A12Q96S37 553 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 CYP2S1Q96SQ9 504 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 P2RY13Q9BPV8 354 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 KCTD10Q9H3F6 313 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 ECT2Q9H8V3 914 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 DLL3Q9NYJ7 618 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 NXF1Q9UBU9 619 aaKnown RBP15.98■□□□□ 0.15
SPG7-210ENST00000564409 MYH10P35580 1976 aa15.98■□□□□ 0.15
SPG7-210ENST00000564409 A0A1B0GVL5 298 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 C2orf78A6NCI8 922 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 ZNF840PA6NDX5 716 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 OTOL1A6NHN0 477 aaPredicted RBP15.97■□□□□ 0.15
SPG7-210ENST00000564409 F8VP50 259 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 MAPK13O15264 365 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 NFATC1O95644 943 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 C4BPAP04003 597 aaKnown RBP15.97■□□□□ 0.15
SPG7-210ENST00000564409 RETP07949 1114 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 ARSAP15289 507 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 TRIM21P19474 475 aaKnown RBP15.97■□□□□ 0.15
SPG7-210ENST00000564409 GJA4P35212 333 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 SYKP43405 635 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 FNTBP49356 437 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 SLC7A9P82251 487 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 ENPEPQ07075 957 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 NCOA4Q13772 614 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 SIM2Q14190 667 aaPredicted RBP15.97■□□□□ 0.15
SPG7-210ENST00000564409 TRIM68Q6AZZ1 485 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 WDR5BQ86VZ2 330 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 DDX42Q86XP3 938 aaKnown RBP eCLIP15.97■□□□□ 0.15
SPG7-210ENST00000564409 CAMKK1Q8N5S9 505 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 PDZD8Q8NEN9 1154 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 SH3RF2Q8TEC5 729 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 OVCA2Q8WZ82 227 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 CCDC34Q96HJ3 373 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 COMMD8Q9NX08 183 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 TRAF3IP3Q9Y228 551 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 FRMD4BQ9Y2L6 1034 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 CACNA1AO00555 2505 aa15.97■□□□□ 0.15
SPG7-210ENST00000564409 LRRIQ3A6PVS8 624 aaPredicted RBP15.96■□□□□ 0.15
SPG7-210ENST00000564409 SLC9A3R1O14745 358 aaPredicted RBP15.96■□□□□ 0.15
SPG7-210ENST00000564409 CALUO43852 315 aaPredicted RBP15.96■□□□□ 0.15
SPG7-210ENST00000564409 NR3C1P04150 777 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 GALK1P51570 392 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 NFIL3Q16649 462 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 EML3Q32P44 896 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 ZACNQ401N2 412 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 PRR23BQ6ZRT6 265 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 DGLUCYQ7Z3D6 616 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 NUP93Q8N1F7 819 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 SPRYD3Q8NCJ5 442 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 RIN3Q8TB24 985 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 B3GNT5Q9BYG0 378 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 SLC8A2Q9UPR5 921 aa15.96■□□□□ 0.15
SPG7-210ENST00000564409 A0A1W2PQ27 194 aa15.95■□□□□ 0.14
SPG7-210ENST00000564409 A0A1W2PQ64 194 aa15.95■□□□□ 0.14
SPG7-210ENST00000564409 A0A1W2PQD8 194 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms