RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 MYO6Q9UM54 1294 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 TNFRSF10BO14763 440 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 SOAT2O75908 522 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 LAMP2P13473 410 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 KRT5P13647 590 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 CD19P15391 556 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 PTK2Q05397 1052 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 BST2Q10589 180 aaKnown RBP17.66■□□□□ 0.42
RNF40-206ENST00000564260 CCDC142Q17RM4 750 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 CLEC20AQ6ZU45 233 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 GET4Q7L5D6 327 aaPredicted RBP17.66■□□□□ 0.42
RNF40-206ENST00000564260 NPAS3Q8IXF0 933 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 FAM71AQ8IYT1 594 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 GJD3Q8N144 294 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 NEK11Q8NG66 645 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 FGF13Q92913 245 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 EDEM3Q9BZQ6 932 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 IL21Q9HBE4 155 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 TSPAN16Q9UKR8 245 aa17.66■□□□□ 0.42
RNF40-206ENST00000564260 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.66■□□□□ 0.42
RNF40-206ENST00000564260 CLDN5O00501 218 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 XPO1O14980 1071 aaKnown RBP17.65■□□□□ 0.42
RNF40-206ENST00000564260 YWHAQP27348 245 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 GABRR2P28476 465 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 GBP2P32456 591 aaPredicted RBP17.65■□□□□ 0.42
RNF40-206ENST00000564260 ORC1Q13415 861 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 NR1I3Q14994 352 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 SYCP1Q15431 976 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 SLC5A9Q2M3M2 681 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 FIGNQ5HY92 759 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 GIPC2Q8TF65 315 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 MRPS31Q92665 395 aaKnown RBP17.65■□□□□ 0.42
RNF40-206ENST00000564260 RPGRIP1Q96KN7 1286 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 SMOQ99835 787 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 GANQ9H2C0 597 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 TRPV4Q9HBA0 871 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 CYLDQ9NQC7 956 aa17.65■□□□□ 0.42
RNF40-206ENST00000564260 PTPRDP23468 1912 aa17.64■□□□□ 0.42
RNF40-206ENST00000564260 A0A0C4DFX4 3053 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 C2CD4DB7Z1M9 353 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 F8VZ95 297 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 F11P03951 625 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 CCDC172P0C7W6 258 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 MYL4P12829 197 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 ADORA2BP29275 332 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 GNA15P30679 374 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 PLA2G4AP47712 749 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 PSEN1P49768 467 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 TUBP50607 506 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 SLC5A3P53794 718 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 MAP3K7CLP57077 242 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 NTHL1P78549 312 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 FANCCQ00597 558 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 ARHGAP44Q17R89 818 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 PKDCCQ504Y2 493 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 GAREM2Q75VX8 874 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 ZNF677Q86XU0 584 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 SCML4Q8N228 414 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 KIAA1958Q8N8K9 716 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 ZMIZ2Q8NF64 920 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 ITFG1Q8TB96 612 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 SHKBP1Q8TBC3 707 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 STK32AQ8WU08 396 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 KCTD13Q8WZ19 329 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 HSFY1Q96LI6 401 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 NUP58Q9BVL2 599 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 ATXN3LQ9H3M9 355 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 TASP1Q9H6P5 420 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 TMEM30AQ9NV96 361 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 OBP2AQ9NY56 170 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 TRPM5Q9NZQ8 1165 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 CDH22Q9UJ99 828 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 FHOD1Q9Y613 1164 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 C2orf16Q68DN1 1984 aa17.64■□□□□ 0.41
RNF40-206ENST00000564260 ANHXE9PGG2 379 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 RNF225M0QZC1 329 aaPredicted RBP17.63■□□□□ 0.41
RNF40-206ENST00000564260 CBFA2T2O43439 604 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 MOSPD3O75425 235 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 CCR2P41597 374 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 GPR15P49685 360 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 CACNA2D1P54289 1103 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 UBASH3AP57075 661 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 RAPGEF1Q13905 1077 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 DRAP1Q14919 205 aaPredicted RBP17.63■□□□□ 0.41
RNF40-206ENST00000564260 HS6ST3Q8IZP7 471 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 ZNF276Q8N554 614 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 STKLD1Q8NE28 680 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 ZNF606Q8WXB4 792 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 PCMTD1Q96MG8 357 aaPredicted RBP17.63■□□□□ 0.41
RNF40-206ENST00000564260 SPAG5Q96R06 1193 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 MYADMQ96S97 322 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 KCNK16Q96T55 309 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 ZNF334Q9HCZ1 680 aaPredicted RBP17.63■□□□□ 0.41
RNF40-206ENST00000564260 FAM207AQ9NSI2 230 aaPredicted RBP17.63■□□□□ 0.41
RNF40-206ENST00000564260 PCDHGC3Q9UN70 934 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 SCML2Q9UQR0 700 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 USP3Q9Y6I4 520 aa17.63■□□□□ 0.41
RNF40-206ENST00000564260 A0A1W2PRU2 124 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 HHLA1C9JL84 531 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms