RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ABI2Q9NYB9 513 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 CALCOCO1Q9P1Z2 691 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 BCCIPQ9P287 314 aaKnown RBP eCLIP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 ARHGAP26Q9UNA1 814 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 MAGED2Q9UNF1 606 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 KNTC1P50748 2209 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 CKAP5Q14008 2032 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 TRAV19A0A0A6YYK7 116 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 A0A1W2PQF6 199 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 FAM149AA5PLN7 773 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 TLX3O43711 291 aaPredicted RBP8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 CLTAP09496 248 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 ZNF883P0CG24 379 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 FDPSP14324 419 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 PAX3P23760 479 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 KRT2P35908 639 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 EIF2S3P41091 472 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 EIF2DP41214 584 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 BNC1Q01954 994 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 CFHR1Q03591 330 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 SMARCB1Q12824 385 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 DHCR24Q15392 516 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 SMAD1Q15797 465 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 CPLX2Q6PUV4 134 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 ADGRG2Q8IZP9 1017 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 GALNT15Q8N3T1 639 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 KNL1Q8NG31 2342 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 PNKPQ96T60 521 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 COL12A1Q99715 3063 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 CCSER1Q9C0I3 900 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 IL21RQ9HBE5 538 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 ZSWIM6Q9HCJ5 1215 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 KMT5AQ9NQR1 393 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 UNC79Q9P2D8 2635 aa8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 RBM19Q9Y4C8 960 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-206ENST00000563343 PLXNA2O75051 1894 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 BTBD18B2RXH4 712 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 E9PAM4 449 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 SLC16A4O15374 487 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 ARHGAP6O43182 974 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 HIP1RO75146 1068 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 APODP05090 189 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 MAPTP10636 758 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 XBP1P17861 261 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 TNFRSF4P43489 277 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 PPP2R3AQ06190 1150 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 DDR2Q16832 855 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 PTPRNQ16849 979 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 WSCD1Q658N2 575 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 JADE1Q6IE81 842 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 RHBDF2Q6PJF5 856 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 FILIP1Q7Z7B0 1213 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 SKAP1Q86WV1 359 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 MIB1Q86YT6 1006 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 ETFBKMTQ8IXQ9 262 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 PGBD3Q8N328 593 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 KIAA1958Q8N8K9 716 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 TTC16Q8NEE8 873 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 SPATA18Q8TC71 538 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 LEO1Q8WVC0 666 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 DNASE2BQ8WZ79 361 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 TSPAN18Q96SJ8 248 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 PKMYT1Q99640 499 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 HNRNPABQ99729 332 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 PI4K2AQ9BTU6 479 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 RUSC1Q9BVN2 902 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 ZDHHC5Q9C0B5 715 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 FAM124BQ9H5Z6 455 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 TRPC7Q9HCX4 862 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 UXTQ9UBK9 157 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 DSEQ9UL01 958 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 BTBD3Q9Y2F9 522 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 PCDHB5Q9Y5E4 795 aa8.32□□□□□ -1.08
HERPUD1-206ENST00000563343 TEX15Q9BXT5 2789 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 TEX51A0A1B0GUA7 166 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 MYMKA6NI61 221 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 SFI1A8K8P3 1242 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 LEFTY2O00292 366 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 CYB561D2O14569 222 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 SNPHO15079 494 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 CLDN3O15551 220 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 XPOTO43592 962 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 PRPF40AO75400 957 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 OLFM2O95897 454 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 NFICP08651 508 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 HDCP19113 662 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 NDUFV2P19404 249 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 CYP2F1P24903 491 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 MAOBP27338 520 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 PSMA5P28066 241 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 MCM7P33993 719 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 GRIA2P42262 883 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 SRSF1Q07955 248 aaKnown RBP eCLIP8.31□□□□□ -1.089e-10■■■■■ 41.4
HERPUD1-206ENST00000563343 MYO1EQ12965 1108 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 NUMA1Q14980 2115 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms