RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 LCP1P13796 627 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 NPR3P17342 541 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 GJC1P36383 396 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 FLT3P36888 993 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 SLC7A5Q01650 507 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 CLEC20AQ6ZU45 233 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 PIGZQ86VD9 579 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 SLC13A5Q86YT5 568 aaPredicted RBP18.98■□□□□ 0.63
COMMD4-208ENST00000563220 CLEC4CQ8WTT0 213 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 RXFP2Q8WXD0 754 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 TMEM209Q96SK2 561 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 NAP1L3Q99457 506 aaPredicted RBP18.98■□□□□ 0.63
COMMD4-208ENST00000563220 CYLDQ9NQC7 956 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 HCSTQ9UBK5 93 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 SCN5AQ14524 2016 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 CCDC188H7C350 402 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 LRCH4O75427 683 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 CLTBP09497 229 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 TYMPP19971 482 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 SNX16P57768 344 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 CBX1P83916 185 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 OVOS1Q6IE37 1185 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 C8orf74Q6P047 294 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 FAM171BQ6P995 826 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.97■□□□□ 0.63
COMMD4-208ENST00000563220 KATNAL2Q8IYT4 538 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 OR10T2Q8NGX3 314 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 DDX47Q9H0S4 455 aaKnown RBP18.97■□□□□ 0.63
COMMD4-208ENST00000563220 FAM53CQ9NYF3 392 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 PCDHB8Q9UN66 801 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 PDGFRAP16234 1089 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 ACADSBP45954 432 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 ZNF143P52747 638 aaPredicted RBP18.97■□□□□ 0.63
COMMD4-208ENST00000563220 RABGGTBP53611 331 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 GLE1Q53GS7 698 aaKnown RBP18.97■□□□□ 0.63
COMMD4-208ENST00000563220 INTS6LQ5JSJ4 861 aaKnown RBP18.97■□□□□ 0.63
COMMD4-208ENST00000563220 SH3PXD2AQ5TCZ1 1133 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 LRRC38Q5VT99 294 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 WDR93Q6P2C0 686 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 ANKS1BQ7Z6G8 1248 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 FAM35AQ86V20 835 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 LRRTM3Q86VH5 581 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 ZDHHC17Q8IUH5 632 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 NPAS4Q8IUM7 802 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 PKMYT1Q99640 499 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 SMOQ99835 787 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 HERPUD2Q9BSE4 406 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 PLEKHA4Q9H4M7 779 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 KRT82Q9NSB4 513 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 TMEM30AQ9NV96 361 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 TMLHEQ9NVH6 421 aa18.97■□□□□ 0.63
COMMD4-208ENST00000563220 NRP1O14786 923 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 FSCN2O14926 492 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 SART1O43290 800 aaKnown RBP18.96■□□□□ 0.63
COMMD4-208ENST00000563220 RAD51CO43502 376 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 FAM200BP0CF97 657 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 GPD1P21695 349 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 ITGB8P26012 769 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 CACNA2D1P54289 1103 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 MAP3K7CLP57077 242 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 CLUL1Q15846 466 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 CCDC70Q6NSX1 233 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 ZMIZ2Q8NF64 920 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 KLHL11Q9NVR0 708 aa18.96■□□□□ 0.63
COMMD4-208ENST00000563220 TADA2AO75478 443 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 AP1G2O75843 785 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 ZRANB2O95218 330 aaKnown RBP eCLIP18.95■□□□□ 0.62
COMMD4-208ENST00000563220 HSPA1AP0DMV8 641 aaKnown RBP18.95■□□□□ 0.62
COMMD4-208ENST00000563220 HSPA1BP0DMV9 641 aaKnown RBP18.95■□□□□ 0.62
COMMD4-208ENST00000563220 IL1R2P27930 398 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 CTCFP49711 727 aaPredicted RBP18.95■□□□□ 0.62
COMMD4-208ENST00000563220 SLC8A3P57103 927 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 SLC25A11Q02978 314 aaKnown RBP18.95■□□□□ 0.62
COMMD4-208ENST00000563220 SIX1Q15475 284 aaPredicted RBP18.95■□□□□ 0.62
COMMD4-208ENST00000563220 C15orf59Q2T9L4 293 aaPredicted RBP18.95■□□□□ 0.62
COMMD4-208ENST00000563220 CCDC14Q49A88 953 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 RAB6CQ53S08 254 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 PRELID2Q8N945 189 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 EXD1Q8NHP7 514 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 KCTD13Q8WZ19 329 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 MYLPFQ96A32 169 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 KCNK16Q96T55 309 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 CNPY3Q9BT09 278 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 PLVAPQ9BX97 442 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 RHOBTB2Q9BYZ6 727 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 RAB6CQ9H0N0 254 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 TTC3P53804 2025 aa18.95■□□□□ 0.62
COMMD4-208ENST00000563220 ARHGEF37A1IGU5 675 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 TBKBP1A7MCY6 615 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 HOXA2O43364 376 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 CAPN15O75808 1086 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 GLI1P08151 1106 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 RARAP10276 462 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 ACAP1Q15027 740 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 BRD3Q15059 726 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 KCTD19Q17RG1 926 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-208ENST00000563220 THEM5Q8N1Q8 247 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 NDRG1Q92597 394 aaKnown RBP18.94■□□□□ 0.62
COMMD4-208ENST00000563220 RNF25Q96BH1 459 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-208ENST00000563220 ACSF2Q96CM8 615 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms