RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 KCNK12Q9HB15 430 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 SIX2Q9NPC8 291 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 UBE2TQ9NPD8 197 aaPredicted RBP17.72■□□□□ 0.43
CLK3-207ENST00000562389 ZMYM5Q9UJ78 669 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 SORCS3Q9UPU3 1222 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 CNTN6Q9UQ52 1028 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 TTC28Q96AY4 2481 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 DCXO43602 365 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 TADA3O75528 432 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 BEST1O76090 585 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 CAVIN2O95810 425 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 ASGR2P07307 311 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 VDRP11473 427 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 ZNF132P52740 706 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 COPB1P53618 953 aaKnown RBP17.71■□□□□ 0.43
CLK3-207ENST00000562389 MFAP3P55082 362 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 USP46P62068 366 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 KCNMA1Q12791 1236 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 SGO2Q562F6 1265 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 DPY19L2P1Q6NXN4 242 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 CLEC20AQ6ZU45 233 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 NUP93Q8N1F7 819 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 ASB16Q96NS5 453 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 VPS16Q9H269 839 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 PNPLA8Q9NP80 782 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 KIAA1257Q9ULG3 409 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 NUMBLQ9Y6R0 609 aa17.71■□□□□ 0.43
CLK3-207ENST00000562389 MYO16Q9Y6X6 1858 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 LRRC10BA6NIK2 292 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 SOBPA7XYQ1 873 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 PI4K2BG5E9Z4 385 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 TNFRSF10BO14763 440 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 RTN3O95197 1032 aaPredicted RBP17.7■□□□□ 0.42
CLK3-207ENST00000562389 ALADP13716 330 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 NPR3P17342 541 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 CDK11BP21127 795 aaKnown RBP17.7■□□□□ 0.42
CLK3-207ENST00000562389 DDX6P26196 483 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLK3-207ENST00000562389 SLC5A3P53794 718 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 MAP3K7CLP57077 242 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 CYP4F8P98187 520 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 APBA1Q02410 837 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 IQCB1Q15051 598 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 STXBP5Q5T5C0 1151 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 GJB7Q6PEY0 223 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 PARM1Q6UWI2 310 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 RBBP8NLQ8NC74 664 aaPredicted RBP17.7■□□□□ 0.42
CLK3-207ENST00000562389 FGF14Q92915 247 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 ZSWIM3Q96MP5 696 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 DUSP16Q9BY84 665 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 SLITRK6Q9H5Y7 841 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 TASP1Q9H6P5 420 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 TRPV4Q9HBA0 871 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 COMMD8Q9NX08 183 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 IL37Q9NZH6 218 aa17.7■□□□□ 0.42
CLK3-207ENST00000562389 BECN2A8MW95 431 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 HHLA1C9JL84 531 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 RNF225M0QZC1 329 aaPredicted RBP17.69■□□□□ 0.42
CLK3-207ENST00000562389 CD19P15391 556 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 FCARP24071 287 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 WEE1P30291 646 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 PPP3CCP48454 512 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 TDGQ13569 410 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 FAM78AQ5JUQ0 283 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 FKBP15Q5T1M5 1219 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 GPR158Q5T848 1215 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 APTXQ7Z2E3 356 aaKnown RBP17.69■□□□□ 0.42
CLK3-207ENST00000562389 ZSCAN18Q8TBC5 510 aaPredicted RBP17.69■□□□□ 0.42
CLK3-207ENST00000562389 RSAD2Q8WXG1 361 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 SHC3Q92529 594 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 MRPS31Q92665 395 aaKnown RBP17.69■□□□□ 0.42
CLK3-207ENST00000562389 SMARCD2Q92925 531 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 TSPAN16Q9UKR8 245 aa17.69■□□□□ 0.42
CLK3-207ENST00000562389 FAM92AA1XBS5 289 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 LGALS16A8MUM7 142 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 O00370 1275 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 ECI2O75521 394 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 ATP1A3P13637 1013 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 RFX1P22670 979 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 YWHAQP27348 245 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 ZXDAP98168 799 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 STILQ15468 1287 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 KLHDC7AQ5VTJ3 777 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 UBALD2Q8IYN6 164 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 ANKRD52Q8NB46 1076 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 OVCA2Q8WZ82 227 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 ELSPBP1Q96BH3 223 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 SLITRK1Q96PX8 696 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 LSM14BQ9BX40 385 aaKnown RBP17.68■□□□□ 0.42
CLK3-207ENST00000562389 CBX8Q9HC52 389 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 PLCB1Q9NQ66 1216 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 DNAJC12Q9UKB3 198 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 AJAP1Q9UKB5 411 aaPredicted RBP17.68■□□□□ 0.42
CLK3-207ENST00000562389 DUSP12Q9UNI6 340 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 NCANO14594 1321 aa17.68■□□□□ 0.42
CLK3-207ENST00000562389 MUC3AQ02505 3323 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 HELZP42694 1942 aaKnown RBP17.67■□□□□ 0.42
CLK3-207ENST00000562389 KRT5P13647 590 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 BCAT1P54687 386 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 SLC8A3P57103 927 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 TAF10Q12962 218 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms