RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 TBC1D13Q9NVG8 400 aa10.02□□□□□ -0.81
CDH13-205ENST00000562307 RNF216Q9NWF9 866 aaPredicted RBP10.02□□□□□ -0.81
CDH13-205ENST00000562307 ASNSD1Q9NWL6 643 aa10.02□□□□□ -0.81
CDH13-205ENST00000562307 PCYOX1Q9UHG3 505 aa10.02□□□□□ -0.81
CDH13-205ENST00000562307 MTUS1Q9ULD2 1270 aa10.02□□□□□ -0.81
CDH13-205ENST00000562307 PCDHB8Q9UN66 801 aa10.02□□□□□ -0.81
CDH13-205ENST00000562307 USTQ9Y2C2 406 aa10.02□□□□□ -0.81
CDH13-205ENST00000562307 CENPFP49454 3210 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 MYBPHLA2RUH7 354 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 FAM187AA6NFU0 413 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 HOXA2O43364 376 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 B4GALT3O60512 393 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 LRCH4O75427 683 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 KRT7P08729 469 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 HSPA8P11142 646 aaKnown RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 TCF4P15884 667 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 NPR3P17342 541 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 ACAT1P24752 427 aaKnown RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 CHRNA3P32297 505 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 CETN2P41208 172 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 PTGIRP43119 386 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 BRCC3P46736 316 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 GJA8P48165 433 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 SLC8A3P57103 927 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 SLC7A5Q01650 507 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 SLC25A11Q02978 314 aaKnown RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 KLF1Q13351 362 aaPredicted RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 DHX34Q14147 1143 aaKnown RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 TAZQ16635 292 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 HADHQ16836 314 aaKnown RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 MDH1BQ5I0G3 518 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 DAB2IPQ5VWQ8 1189 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 TRNP1Q6NT89 227 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 CLEC20AQ6ZU45 233 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 IFT20Q8IY31 132 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 EMC1Q8N766 993 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 CMASQ8NFW8 434 aaPredicted RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDH13-205ENST00000562307 SEC14L1Q92503 715 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 RBM41Q96IZ5 413 aaKnown RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 PIWIL1Q96J94 861 aaKnown RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 DDX47Q9H0S4 455 aaKnown RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 LRRC19Q9H756 370 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 CSNK1G1Q9HCP0 422 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 TBX21Q9UL17 535 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 EFR3BQ9Y2G0 817 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 PCDHB7Q9Y5E2 793 aa10.01□□□□□ -0.81
CDH13-205ENST00000562307 TIMM13Q9Y5L4 95 aaPredicted RBP10.01□□□□□ -0.81
CDH13-205ENST00000562307 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
CDH13-205ENST00000562307 C3orf70A6NLC5 250 aaPredicted RBP10□□□□□ -0.81
CDH13-205ENST00000562307 CLDN5O00501 218 aa10□□□□□ -0.81
CDH13-205ENST00000562307 ZMYND10O75800 440 aa10□□□□□ -0.81
CDH13-205ENST00000562307 RNF8O76064 485 aa10□□□□□ -0.81
CDH13-205ENST00000562307 ENDOD1O94919 500 aa10□□□□□ -0.81
CDH13-205ENST00000562307 SEC31AO94979 1220 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 HEXIM1O94992 359 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 TRUB2O95900 331 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 ITGB1P05556 798 aa10□□□□□ -0.81
CDH13-205ENST00000562307 FAM200BP0CF97 657 aa10□□□□□ -0.81
CDH13-205ENST00000562307 PDGFRAP16234 1089 aa10□□□□□ -0.81
CDH13-205ENST00000562307 FLT3P36888 993 aa10□□□□□ -0.81
CDH13-205ENST00000562307 COILP38432 576 aaPredicted RBP10□□□□□ -0.81
CDH13-205ENST00000562307 SSR1P43307 286 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 PTPN9P43378 593 aa10□□□□□ -0.81
CDH13-205ENST00000562307 FNTAP49354 379 aa10□□□□□ -0.81
CDH13-205ENST00000562307 ATN1P54259 1190 aaPredicted RBP10□□□□□ -0.81
CDH13-205ENST00000562307 DRG2P55039 364 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 MRPS25P82663 173 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 TAF5Q15542 800 aa10□□□□□ -0.81
CDH13-205ENST00000562307 MAPRE1Q15691 268 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 CCNG2Q16589 344 aa10□□□□□ -0.81
CDH13-205ENST00000562307 CCDC142Q17RM4 750 aa10□□□□□ -0.81
CDH13-205ENST00000562307 TRIM60Q495X7 471 aa10□□□□□ -0.81
CDH13-205ENST00000562307 CCDC14Q49A88 953 aa10□□□□□ -0.81
CDH13-205ENST00000562307 MAP9Q49MG5 647 aa10□□□□□ -0.81
CDH13-205ENST00000562307 ATP13A4Q4VNC1 1196 aa10□□□□□ -0.81
CDH13-205ENST00000562307 INTS6LQ5JSJ4 861 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 RAB41Q5JT25 222 aa10□□□□□ -0.81
CDH13-205ENST00000562307 EFHC1Q5JVL4 640 aa10□□□□□ -0.81
CDH13-205ENST00000562307 TXNRD3NBQ6F5E7 133 aa10□□□□□ -0.81
CDH13-205ENST00000562307 FAM35AQ86V20 835 aa10□□□□□ -0.81
CDH13-205ENST00000562307 PIGZQ86VD9 579 aa10□□□□□ -0.81
CDH13-205ENST00000562307 THEM5Q8N1Q8 247 aa10□□□□□ -0.81
CDH13-205ENST00000562307 CENPIQ92674 756 aaPredicted RBP10□□□□□ -0.81
CDH13-205ENST00000562307 SLCO2A1Q92959 643 aa10□□□□□ -0.81
CDH13-205ENST00000562307 MAGOHBQ96A72 148 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 PCED1BQ96HM7 432 aa10□□□□□ -0.81
CDH13-205ENST00000562307 SLITRK1Q96PX8 696 aa10□□□□□ -0.81
CDH13-205ENST00000562307 SMOQ99835 787 aa10□□□□□ -0.81
CDH13-205ENST00000562307 HERPUD2Q9BSE4 406 aa10□□□□□ -0.81
CDH13-205ENST00000562307 C11orf84Q9BUA3 381 aaPredicted RBP10□□□□□ -0.81
CDH13-205ENST00000562307 DDX23Q9BUQ8 820 aaKnown RBP10□□□□□ -0.81
CDH13-205ENST00000562307 FUT8Q9BYC5 575 aa10□□□□□ -0.81
CDH13-205ENST00000562307 OSBPL8Q9BZF1 889 aa10□□□□□ -0.81
CDH13-205ENST00000562307 NRDE2Q9H7Z3 1164 aa10□□□□□ -0.81
CDH13-205ENST00000562307 EPB41L5Q9HCM4 733 aa10□□□□□ -0.81
CDH13-205ENST00000562307 HOMER3Q9NSC5 361 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms