RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 PIGHQ14442 188 aaPredicted RBP28.16■■■□□ 2.1
AP4E1-207ENST00000561441 RSRC2Q7L4I2 434 aaKnown RBP28.16■■■□□ 2.1
AP4E1-207ENST00000561441 NIPA2Q8N8Q9 360 aa28.16■■■□□ 2.1
AP4E1-207ENST00000561441 PIWIL1Q96J94 861 aaKnown RBP28.16■■■□□ 2.1
AP4E1-207ENST00000561441 CWH43Q9H720 699 aa28.16■■■□□ 2.1
AP4E1-207ENST00000561441 TMLHEQ9NVH6 421 aa28.16■■■□□ 2.1
AP4E1-207ENST00000561441 LTBP2Q14767 1821 aa28.16■■■□□ 2.1
AP4E1-207ENST00000561441 NT5C1B-RDH14C9J2C7 533 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 AP1G2O75843 785 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 PBX3P40426 434 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 SLC6A3Q01959 620 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 FAM171A1Q5VUB5 890 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 DAB2IPQ5VWQ8 1189 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 RASGEF1CQ8N431 466 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 EMC1Q8N766 993 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 ACTRT1Q8TDG2 376 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 KCTD13Q8WZ19 329 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 TSC1Q92574 1164 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 GOLGA1Q92805 767 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 ZNF689Q96CS4 500 aaPredicted RBP28.15■■■□□ 2.1
AP4E1-207ENST00000561441 RPGRIP1Q96KN7 1286 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 TMEM59LQ9UK28 342 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 USTQ9Y2C2 406 aa28.15■■■□□ 2.1
AP4E1-207ENST00000561441 SF3B1O75533 1304 aaKnown RBP eCLIP28.15■■■□□ 2.19e-6■■■■■ 68.9
AP4E1-207ENST00000561441 F8VP50 259 aa28.14■■■□□ 2.1
AP4E1-207ENST00000561441 BAIAP3O94812 1187 aa28.14■■■□□ 2.1
AP4E1-207ENST00000561441 LCP1P13796 627 aa28.14■■■□□ 2.1
AP4E1-207ENST00000561441 FGFR3P22607 806 aa28.14■■■□□ 2.1
AP4E1-207ENST00000561441 MAP3K7CLP57077 242 aa28.14■■■□□ 2.1
AP4E1-207ENST00000561441 MAPRE1Q15691 268 aaKnown RBP28.14■■■□□ 2.1
AP4E1-207ENST00000561441 FNDC1Q4ZHG4 1894 aaPredicted RBP28.14■■■□□ 2.1
AP4E1-207ENST00000561441 VARS2Q5ST30 1063 aaKnown RBP28.14■■■□□ 2.1
AP4E1-207ENST00000561441 FUT10Q6P4F1 479 aa28.14■■■□□ 2.1
AP4E1-207ENST00000561441 TMCO2Q7Z6W1 182 aaPredicted RBP28.14■■■□□ 2.1
AP4E1-207ENST00000561441 TMEM173Q86WV6 379 aaPredicted RBP28.14■■■□□ 2.1
AP4E1-207ENST00000561441 SMOQ99835 787 aa28.14■■■□□ 2.1
AP4E1-207ENST00000561441 PSMA2P25787 234 aa28.14■■■□□ 2.09
AP4E1-207ENST00000561441 RNASE9P60153 205 aaKnown RBP28.14■■■□□ 2.09
AP4E1-207ENST00000561441 ERCC6LQ2NKX8 1250 aa28.14■■■□□ 2.09
AP4E1-207ENST00000561441 BCL7CQ8WUZ0 217 aaPredicted RBP28.14■■■□□ 2.09
AP4E1-207ENST00000561441 UBXN4Q92575 508 aa28.14■■■□□ 2.09
AP4E1-207ENST00000561441 KHSRPQ92945 711 aaKnown RBP eCLIP28.14■■■□□ 2.09
AP4E1-207ENST00000561441 SMARCD1Q96GM5 515 aa28.14■■■□□ 2.09
AP4E1-207ENST00000561441 COL4A6Q14031 1691 aa28.14■■■□□ 2.09
AP4E1-207ENST00000561441 CACNA2D1P54289 1103 aa28.13■■■□□ 2.09
AP4E1-207ENST00000561441 TAS2R40P59535 323 aa28.13■■■□□ 2.09
AP4E1-207ENST00000561441 ELAVL2Q12926 359 aaKnown RBP28.13■■■□□ 2.09
AP4E1-207ENST00000561441 MRPL58Q14197 206 aaKnown RBP28.13■■■□□ 2.09
AP4E1-207ENST00000561441 CC2D1AQ6P1N0 951 aaPredicted RBP28.13■■■□□ 2.09
AP4E1-207ENST00000561441 C16orf59Q7L2K0 433 aa28.13■■■□□ 2.09
AP4E1-207ENST00000561441 SPATA4Q8NEY3 305 aa28.13■■■□□ 2.09
AP4E1-207ENST00000561441 ZMIZ2Q8NF64 920 aa28.13■■■□□ 2.09
AP4E1-207ENST00000561441 ZCWPW1Q9H0M4 648 aa28.13■■■□□ 2.09
AP4E1-207ENST00000561441 RC3H2Q9HBD1 1191 aaKnown RBP28.13■■■□□ 2.09
AP4E1-207ENST00000561441 TMEM30AQ9NV96 361 aa28.13■■■□□ 2.09
AP4E1-207ENST00000561441 PRKAG2Q9UGJ0 569 aa28.13■■■□□ 2.09
AP4E1-207ENST00000561441 TTC7AQ9ULT0 858 aaPredicted RBP28.13■■■□□ 2.09
AP4E1-207ENST00000561441 ALDH7A1P49419 539 aaKnown RBP28.12■■■□□ 2.09
AP4E1-207ENST00000561441 RWDD2BP57060 319 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 ITIH3Q06033 890 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 ZNF211Q13398 564 aaPredicted RBP28.12■■■□□ 2.09
AP4E1-207ENST00000561441 TAF5Q15542 800 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 FAM117BQ6P1L5 589 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 CEP57Q86XR8 500 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 RHOT1Q8IXI2 618 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 KCNK16Q96T55 309 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.12■■■□□ 2.09
AP4E1-207ENST00000561441 RHOBTB2Q9BYZ6 727 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 UBXN6Q9BZV1 441 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 CSNK1G1Q9HCP0 422 aa28.12■■■□□ 2.09
AP4E1-207ENST00000561441 C2CD4BA6NLJ0 364 aa28.11■■■□□ 2.09
AP4E1-207ENST00000561441 SCNN1AP37088 669 aa28.11■■■□□ 2.09
AP4E1-207ENST00000561441 TEX35Q5T0J7 233 aa28.11■■■□□ 2.09
AP4E1-207ENST00000561441 TRNP1Q6NT89 227 aa28.11■■■□□ 2.09
AP4E1-207ENST00000561441 OTOP2Q7RTS6 562 aa28.11■■■□□ 2.09
AP4E1-207ENST00000561441 NOA1Q8NC60 698 aaKnown RBP28.11■■■□□ 2.09
AP4E1-207ENST00000561441 CLEC4CQ8WTT0 213 aa28.11■■■□□ 2.09
AP4E1-207ENST00000561441 RNPC3Q96LT9 517 aaKnown RBP28.11■■■□□ 2.09
AP4E1-207ENST00000561441 PGRMC1O00264 195 aaKnown RBP28.1■■■□□ 2.09
AP4E1-207ENST00000561441 PSTPIP1O43586 416 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 GRAP2O75791 330 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 OR4Q2P0C623 313 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 GPD1P21695 349 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 BDNFP23560 247 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 ZNF143P52747 638 aaPredicted RBP28.1■■■□□ 2.09
AP4E1-207ENST00000561441 C2orf54Q08AI8 447 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 ADIGQ0VDE8 80 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 PPIGQ13427 754 aaKnown RBP eCLIP28.1■■■□□ 2.09
AP4E1-207ENST00000561441 SLC26A9Q7LBE3 791 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 RXFP2Q8WXD0 754 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 BADQ92934 168 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 B3GALT6Q96L58 329 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 LRRC4Q9HBW1 653 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.1■■■□□ 2.09
AP4E1-207ENST00000561441 PYGMP11217 842 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 FLT3P36888 993 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 SSR1P43307 286 aaKnown RBP28.1■■■□□ 2.09
AP4E1-207ENST00000561441 RABGGTBP53611 331 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 TUBB4BP68371 445 aa28.1■■■□□ 2.09
AP4E1-207ENST00000561441 ADCY1Q08828 1119 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms