RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 VPS37CA5D8V6 355 aaPredicted RBP12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 ZNF233A6NK53 670 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 C4orf47A7E2U8 309 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 PRPF6O94906 941 aaKnown RBP12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 OLFM2O95897 454 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 TNNC2P02585 160 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 PDCP20941 246 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 WARSP23381 471 aaKnown RBP12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 BDNFP23560 247 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 ANXA13P27216 316 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 GRIK1P39086 918 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 STAT6P42226 847 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 PSMC1P62191 440 aaKnown RBP12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 NOP14P78316 857 aaKnown RBP12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 SLC7A9P82251 487 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 MRPS21P82921 87 aaKnown RBP12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 CRY1Q16526 586 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 DUOXA2Q1HG44 320 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 GAB4Q2WGN9 574 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 DAB2IPQ5VWQ8 1189 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 PSAPL1Q6NUJ1 521 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 ADGRG2Q8IZP9 1017 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 MYCBPAPQ8TBZ2 947 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 CLIC6Q96NY7 704 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 TRPM5Q9NZQ8 1165 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 MMP17Q9ULZ9 603 aa12.64□□□□□ -0.39
CARMIL3-204ENST00000561354 PTPRJQ12913 1337 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 CHD8Q9HCK8 2581 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 HELZP42694 1942 aaKnown RBP12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 A0A0A0MRY4 1105 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 ZNF840PA6NDX5 716 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 LEFTY2O00292 366 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 SLC9A3R1O14745 358 aaPredicted RBP12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 TRIM66O15016 1216 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 KHNYNO15037 678 aaKnown RBP12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 EIF2DP41214 584 aaKnown RBP12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 NOVA1P51513 510 aaKnown RBP12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 USP46P62068 366 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 CYP27A1Q02318 531 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 CUL4AQ13619 759 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 HSF5Q4G112 596 aaPredicted RBP12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 C2orf27AQ580R0 203 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 LMBRD2Q68DH5 695 aaPredicted RBP12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 ANO7Q6IWH7 933 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 STXBP4Q6ZWJ1 553 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 WDR49Q8IV35 697 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 CCDC65Q8IXS2 484 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 NOC3LQ8WTT2 800 aaKnown RBP12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 PCED1BQ96HM7 432 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 C8orf48Q96LL4 319 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 TPSD1Q9BZJ3 242 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 KIAA1586Q9HCI6 787 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 INVSQ9Y283 1065 aa12.63□□□□□ -0.39
CARMIL3-204ENST00000561354 TACC1O75410 805 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 CYP17A1P05093 508 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 PROS1P07225 676 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 CEACAM1P13688 526 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 CSRP1P21291 193 aaKnown RBP12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 SEC13P55735 322 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 RESTQ13127 1097 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 DHCR24Q15392 516 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 TRAPPC11Q7Z392 1133 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 CYP2U1Q7Z449 544 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 FILIP1Q7Z7B0 1213 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 CCDC33Q8N5R6 958 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 MDGA1Q8NFP4 955 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 OLIG1Q8TAK6 271 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 PNKPQ96T60 521 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 MMS19Q96T76 1030 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 RNF38Q9H0F5 515 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 TMEM9BQ9NQ34 198 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 ABCA7Q8IZY2 2146 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 NUP205Q92621 2012 aa12.62□□□□□ -0.39
CARMIL3-204ENST00000561354 PTPRDP23468 1912 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 A0A087X0B3 334 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 F8VP50 259 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 CDX4O14627 284 aaPredicted RBP12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 ALDH1A2O94788 518 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 OAS1P00973 400 aaKnown RBP12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 BCKDHBP21953 392 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 GNL1P36915 607 aaPredicted RBP12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 TAF10Q12962 218 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 BECN1Q14457 450 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 TDRD10Q5VZ19 366 aaKnown RBP12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 FAM173BQ6P4H8 233 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 TMEM92Q6UXU6 159 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 SLITRK1Q96PX8 696 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 MRPL45Q9BRJ2 306 aaKnown RBP12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 PANK2Q9BZ23 570 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 HSPBP1Q9NZL4 362 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 TBC1D14Q9P2M4 693 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms