RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 ATXN1P54253 815 aaKnown RBP14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 FCGRTP55899 365 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 GUCY1A3Q02108 690 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 ZNF365Q70YC5 407 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 CD302Q8IX05 232 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 RCOR2Q8IZ40 523 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 ART4Q93070 314 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 MCRS1Q96EZ8 462 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 GAD1Q99259 594 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 PAAF1Q9BRP4 392 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 MAGEB5Q9BZ81 275 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 AGO3Q9H9G7 860 aaKnown RBP14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 NGRNQ9NPE2 291 aaKnown RBP14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 AAASQ9NRG9 546 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 GTF2IRD1Q9UHL9 959 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 GAS8O95995 478 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 ASGR1P07306 291 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 ATF2P15336 505 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 INHBEP58166 350 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 MRPS6P82932 125 aaKnown RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 TFDP3Q5H9I0 405 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 MFSD14CQ5VZR4 134 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 APBB1IPQ7Z5R6 666 aaPredicted RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 TADA2BQ86TJ2 420 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 NT5DC4Q86YG4 428 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 ATL2Q8NHH9 583 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 SLC2A14Q8TDB8 520 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 ATP6V1G3Q96LB4 118 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 MTG1Q9BT17 334 aaPredicted RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 XPNPEP3Q9NQH7 507 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 C3orf70A6NLC5 250 aaPredicted RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 LIASO43766 372 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 CST8O60676 142 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 CDC42EP1Q00587 391 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 BYSLQ13895 437 aaKnown RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 P3H1Q32P28 736 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 TMBIM4Q9HC24 238 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 RNF186Q9NXI6 227 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 MTRF1LQ9UGC7 380 aaKnown RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 USP18Q9UMW8 372 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 FOXO6A8MYZ6 492 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 PIRO00625 290 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 CAND2O75155 1236 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 GHRP10912 638 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 GNAT1P11488 350 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 TKTP29401 623 aaKnown RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 GNL1P36915 607 aaPredicted RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 THPOP40225 353 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 DRG2P55039 364 aaKnown RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 TAP1Q03518 808 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 ZNF268Q14587 947 aaPredicted RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 KCNA10Q16322 511 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 CCNG2Q16589 344 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 SYCP2LQ5T4T6 812 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 DENND2CQ68D51 928 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 NPNTQ6UXI9 565 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 KDM7AQ6ZMT4 941 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 OSTM1Q86WC4 334 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 CCDC33Q8N5R6 958 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 LRRC52Q8N7C0 313 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 NIPA2Q8N8Q9 360 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 KCTD6Q8NC69 237 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 EPS8L3Q8TE67 593 aaKnown RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 SNF8Q96H20 258 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 ADAM33Q9BZ11 813 aa14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 NOVA2Q9UNW9 492 aaKnown RBP14.79□□□□□ -0.04
CARMIL3-203ENST00000560349 CASTOR2A6NHX0 329 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 I3L4J1 428 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 M0QZ92 97 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 PAPSS1O43252 624 aaPredicted RBP14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 TJP3O95049 919 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 CPP00450 1065 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 NR1D1P20393 614 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 HOXC8P31273 242 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 GDF10P55107 478 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 GJA9P57773 515 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 LILRA4P59901 499 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 MTMR3Q13615 1198 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 PTK6Q13882 451 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 MICALL1Q8N3F8 863 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 ACTL9Q8TC94 416 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 PABPC3Q9H361 631 aaKnown RBP14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 TRMT13Q9NUP7 481 aaKnown RBP14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 MIOSQ9NXC5 875 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 HESX1Q9UBX0 185 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 RNF8O76064 485 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 STAU1O95793 577 aaKnown RBP14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 PECAM1P16284 738 aaPredicted RBP14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 CD52P31358 61 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 CETN2P41208 172 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 GABRB2P47870 512 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 LIG3P49916 1009 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 OTUD4Q01804 1114 aaKnown RBP14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 ZC3H12AQ5D1E8 599 aaKnown RBP14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 EMC10Q5UCC4 262 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 IZUMO3Q5VZ72 239 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 OLFML1Q6UWY5 402 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms