RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 PHKBQ93100 1093 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 PPP2R3CQ969Q6 453 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 SPSB4Q96A44 273 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 MSLNLQ96KJ4 702 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 ALG8Q9BVK2 526 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 KRTAP1-5Q9BYS1 174 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 CHST8Q9H2A9 424 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 AS3MTQ9HBK9 375 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 GBA2Q9HCG7 927 aaPredicted RBP4.06□□□□□ -1.76
CASC4-210ENST00000559550 CORO2BQ9UQ03 480 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 INSL6Q9Y581 213 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 CDY1Q9Y6F8 540 aa4.06□□□□□ -1.76
CASC4-210ENST00000559550 A1L4Q6 167 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 H7C4K7 107 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 SLC16A3O15427 465 aaKnown RBP4.05□□□□□ -1.76
CASC4-210ENST00000559550 TLR5O60602 858 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 EBLN1P0CF75 366 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 TRIM27P14373 513 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 KLRC1P26715 233 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 PDE6CP51160 858 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 BMPR2Q13873 1038 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 NPY5RQ15761 445 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 ZNF618Q5T7W0 954 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 TSTD2Q5T7W7 516 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 FCRL6Q6DN72 434 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 ARHGEF25Q86VW2 580 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 DNAJB14Q8TBM8 379 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 R3HDM4Q96D70 268 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 BTBD1Q9H0C5 482 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 NUP62CLQ9H1M0 184 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 XPNPEP3Q9NQH7 507 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 SERTAD4Q9NUC0 356 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 SLC17A6Q9P2U8 582 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 DNMT3BQ9UBC3 853 aaKnown RBP4.05□□□□□ -1.76
CASC4-210ENST00000559550 ADAM21Q9UKJ8 722 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 HDAC9Q9UKV0 1011 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 ENTPD2Q9Y5L3 495 aa4.05□□□□□ -1.76
CASC4-210ENST00000559550 POLR2AP24928 1970 aaKnown RBP4.04□□□□□ -1.76
CASC4-210ENST00000559550 LOC102723971A0A1B0GUV8 181 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 LRRC3CA6NJW4 275 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 RAB27BO00194 218 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 PMM2O15305 246 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 RASSF9O75901 435 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 TTLL1O95922 423 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 TXNP10599 105 aaKnown RBP4.04□□□□□ -1.76
CASC4-210ENST00000559550 DRD4P21917 467 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 PTDSS1P48651 473 aaKnown RBP4.04□□□□□ -1.76
CASC4-210ENST00000559550 ITGA8P53708 1063 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 PRKAG1P54619 331 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 SATB1Q01826 763 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 ZNF543Q08ER8 600 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 HSP90AB2PQ58FF8 381 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 TEDDM1Q5T9Z0 273 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 STRIP1Q5VSL9 837 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 CACHD1Q5VU97 1274 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 FBXO42Q6P3S6 717 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 KSR2Q6VAB6 950 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 ZNF551Q7Z340 670 aaPredicted RBP4.04□□□□□ -1.76
CASC4-210ENST00000559550 RASAL3Q86YV0 1011 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 ABRAQ8N0Z2 381 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 PJA1Q8NG27 643 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 OSCP1Q8WVF1 389 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 SNX22Q96L94 193 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 UROC1Q96N76 676 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 PPP1R9BQ96SB3 815 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 TIMP4Q99727 224 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 C17orf80Q9BSJ5 609 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 NAA15Q9BXJ9 866 aaKnown RBP4.04□□□□□ -1.76
CASC4-210ENST00000559550 GLOD4Q9HC38 313 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 CPNE5Q9HCH3 593 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 ARHGEF3Q9NR81 526 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 SEMA4GQ9NTN9 838 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 ZSCAN32Q9NX65 697 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 DLL3Q9NYJ7 618 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 MID2Q9UJV3 735 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 ITGB1BP2Q9UKP3 347 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 PAXBP1Q9Y5B6 917 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 SNX13Q9Y5W8 968 aa4.04□□□□□ -1.76
CASC4-210ENST00000559550 RHPN2P1A8MT19 583 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 KPNA5O15131 536 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 RRP9O43818 475 aaKnown RBP4.03□□□□□ -1.76
CASC4-210ENST00000559550 SRGAP2O75044 1071 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 NXPH3O95157 252 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 RASAL1O95294 804 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 IGLV2-14P01704 120 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 MT-ND5P03915 603 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 CYP2C18P33260 490 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 CARSP49589 748 aaKnown RBP4.03□□□□□ -1.76
CASC4-210ENST00000559550 PRIM2P49643 509 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 CCT8P50990 548 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 TBX4P57082 545 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 SAFBQ15424 915 aaKnown RBP eCLIP4.03□□□□□ -1.76
CASC4-210ENST00000559550 AKNAD1Q5T1N1 836 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 KLHDC7AQ5VTJ3 777 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 SLC9A4Q6AI14 798 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 RD3Q7Z3Z2 195 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 GRASPQ7Z6J2 395 aaPredicted RBP4.03□□□□□ -1.76
CASC4-210ENST00000559550 AMIGO2Q86SJ2 522 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 LIX1LQ8IVB5 337 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 CCAR1Q8IX12 1150 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms