RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 PCDHB9Q9Y5E1 797 aa19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 TCRBV21S2A2A0A5A6 115 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 ANKRD63C9JTQ0 380 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 LEFTY2O00292 366 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 SLC9A3R1O14745 358 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 PFKLP17858 780 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 ITPKAP23677 461 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 PCSK1P29120 753 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 POLR2BP30876 1174 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 CFAP221Q4G0U5 840 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 TMEM119Q4V9L6 283 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 C19orf48Q6RUI8 117 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 SLC36A4Q6YBV0 504 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 FILIP1Q7Z7B0 1213 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 FRMD1Q8N878 549 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 IL17RCQ8NAC3 791 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 CACTINQ8WUQ7 758 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 POMGNT1Q8WZA1 660 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 FUBP3Q96I24 572 aaKnown RBP eCLIP19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 TRPM5Q9NZQ8 1165 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 L1RE1Q9UN81 338 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 AGAP1Q9UPQ3 857 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 R3HCC1Q9Y3T6 440 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 PLXND1Q9Y4D7 1925 aa19.1■□□□□ 0.65
TSPAN3-204ENST00000558394 FAM221BA6H8Z2 402 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 SGK1O00141 431 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 ZBTB24O43167 697 aaPredicted RBP19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 KAT7O95251 611 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 SYPP08247 313 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 SERPINF2P08697 491 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 HNRNPLP14866 589 aaKnown RBP eCLIP19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 LHX1P48742 406 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 ATP2C1P98194 919 aaPredicted RBP19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 TFAMQ00059 246 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 GTF2BQ00403 316 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 RPL6Q02878 288 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 RESTQ13127 1097 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 MAP7D1Q3KQU3 841 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 C4orf50Q6ZRC1 276 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 RASSF8Q8NHQ8 419 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 LRRC15Q8TF66 581 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 FSCN3Q9NQT6 498 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 EHD2Q9NZN4 543 aa19.09■□□□□ 0.65
TSPAN3-204ENST00000558394 ANTXRLA6NF34 631 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 EIF4E1BA6NMX2 242 aaKnown RBP19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 ADH1CP00326 375 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 CYP17A1P05093 508 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 ITGB3P05106 788 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 ANXA13P27216 316 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 EIF2DP41214 584 aaKnown RBP19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 ZNF131P52739 623 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 SCAPQ12770 1279 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 POSTNQ15063 836 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 DHCR24Q15392 516 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 RILPL1Q5EBL4 403 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 PEAR1Q5VY43 1037 aaPredicted RBP19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 MCTP1Q6DN14 999 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 PDZD3Q86UT5 571 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 MINDY1Q8N5J2 469 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 ARHGEF4Q9NR80 690 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 MAGEC2Q9UBF1 373 aaPredicted RBP19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 GPSM3Q9Y4H4 160 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 SNX9Q9Y5X1 595 aa19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 MYO18AQ92614 2054 aaKnown RBP19.08■□□□□ 0.64
TSPAN3-204ENST00000558394 TISP43B9A030 160 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 EIF5BO60841 1220 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 ABL1P00519 1130 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 KRT19P08727 400 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 GRIK1P39086 918 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 UBA7P41226 1012 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 GRIA2P42262 883 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 MAGEA11P43364 429 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 SLC6A11P48066 632 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 TRMT11Q7Z4G4 463 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 RAB44Q7Z6P3 723 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 ADGRF2Q8IZF7 708 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 ADGRG2Q8IZP9 1017 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 DEFB119Q8N690 84 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 KIAA1958Q8N8K9 716 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 ZSCAN31Q96LW9 406 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 CCDC86Q9H6F5 360 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 MYOFQ9NZM1 2061 aa19.07■□□□□ 0.64
TSPAN3-204ENST00000558394 ARHGAP33O14559 1287 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 SLC26A4O43511 780 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 TNFRSF4P43489 277 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 FAM193AP78312 1265 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 KDSRQ06136 332 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 ZNF33AQ06730 810 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 TRIP6Q15654 476 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 GAB4Q2WGN9 574 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 PREPLQ4J6C6 727 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 EMC10Q5UCC4 262 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 ARL6IP4Q66PJ3 421 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 DENND5BQ6ZUT9 1274 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 NUDT18Q6ZVK8 323 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 CSGALNACT2Q8N6G5 542 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 TOP6BLQ8N6T0 577 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 LRRC52Q8N7C0 313 aa19.06■□□□□ 0.64
TSPAN3-204ENST00000558394 SPRYD3Q8NCJ5 442 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms