RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 PCDHA7Q9UN72 937 aa14.52□□□□□ -0.09
SNRPA1-204ENST00000558020 ARHGAP26Q9UNA1 814 aa14.52□□□□□ -0.09
SNRPA1-204ENST00000558020 A8MXQ7 604 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 SLC9A3R1O14745 358 aaPredicted RBP14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 HCRTO43612 131 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 CLSTN1O94985 981 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 NFATC1O95644 943 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 STAU1O95793 577 aaKnown RBP14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 SLFN14P0C7P3 912 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 TCF3P15923 654 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 TGM1P22735 817 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 ATXN1P54253 815 aaKnown RBP14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 EHHADHQ08426 723 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 DMWDQ09019 674 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 ZNF77Q15935 545 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 BMT2Q1RMZ1 405 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 MDH1BQ5I0G3 518 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 RESP18Q5W5W9 173 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 CACNA2D4Q7Z3S7 1137 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 GAB3Q8WWW8 586 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 CD101Q93033 1021 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 LOXL4Q96JB6 756 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 SLITRK1Q96PX8 696 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 SLC22A12Q96S37 553 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 BLZF1Q9H2G9 400 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 SEMA4GQ9NTN9 838 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 GCNT4Q9P109 453 aa14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 NXF1Q9UBU9 619 aaKnown RBP14.51□□□□□ -0.09
SNRPA1-204ENST00000558020 ATP8B3O60423 1300 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 C2orf78A6NCI8 922 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 RNF40O75150 1001 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 TADA3O75528 432 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 RPP40O75818 363 aaKnown RBP14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 AKAP3O75969 853 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 ABL1P00519 1130 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 EGFP01133 1207 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 CCDC192P0DO97 292 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 P4HA1P13674 534 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 TRIM21P19474 475 aaKnown RBP14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 SRSF5Q13243 272 aaKnown RBP14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 BIRC3Q13489 604 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 EML3Q32P44 896 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 FAM160A2Q8N612 972 aaPredicted RBP14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 NETO1Q8TDF5 533 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 ACDQ96AP0 544 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 TNIP3Q96KP6 325 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 MRPL45Q9BRJ2 306 aaKnown RBP14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 TTLL2Q9BWV7 592 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 PARD6AQ9NPB6 346 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 USP25Q9UHP3 1055 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 RCOR1Q9UKL0 485 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 WNT6Q9Y6F9 365 aa14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 KIF26AQ9ULI4 1882 aaPredicted RBP14.5□□□□□ -0.09
SNRPA1-204ENST00000558020 MED19A0JLT2 244 aaPredicted RBP14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 ZNF840PA6NDX5 716 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 F8VP50 259 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 RTN3O95197 1032 aaPredicted RBP14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 KIF20AO95235 890 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 MYL1P05976 194 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 MYL6P60660 151 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 USP4Q13107 963 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 CUL4BQ13620 913 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 CCDC142Q17RM4 750 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 ZNF667Q5HYK9 610 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 SYT13Q7L8C5 426 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 DDX42Q86XP3 938 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 NUP93Q8N1F7 819 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 B3GALNT2Q8NCR0 500 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 PDZD8Q8NEN9 1154 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 CCDC47Q96A33 483 aaKnown RBP14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 CHFRQ96EP1 664 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 FBRSL1Q9HCM7 1045 aaKnown RBP14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 EXOC1Q9NV70 894 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 C2orf42Q9NWW7 574 aa14.49□□□□□ -0.09
SNRPA1-204ENST00000558020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 LEFTY2O00292 366 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 APBB3O95704 486 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 RPN1P04843 607 aaKnown RBP14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 YWHAQP27348 245 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 CASP1P29466 404 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 PXNP49023 591 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 USP46P62068 366 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 SLC7A9P82251 487 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 TAF10Q12962 218 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 SGSM1Q2NKQ1 1148 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 ZNF699Q32M78 642 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 PRR23CQ6ZRP0 262 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 RPLP0P6Q8NHW5 317 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 RIN3Q8TB24 985 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 PARD3BQ8TEW8 1205 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 TMEM174Q8WUU8 243 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 DDX1Q92499 740 aaKnown RBP14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 ZNF516Q92618 1163 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 DNAI2Q9GZS0 605 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 LINC00597Q9H2U6 94 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 VRTNQ9H8Y1 702 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 FRMD4BQ9Y2L6 1034 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 OBSL1O75147 1896 aa14.48□□□□□ -0.09
SNRPA1-204ENST00000558020 DNAH14Q0VDD8 3507 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms