RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 BDNFP23560 247 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 ELF1P32519 619 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 EIF4A3P38919 411 aaKnown RBP11.9□□□□□ -0.5
FOXN3-212ENST00000556541 ARID5AQ03989 594 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 C1QBPQ07021 282 aaKnown RBP11.9□□□□□ -0.5
FOXN3-212ENST00000556541 PDE4CQ08493 712 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 HS1BP3Q53T59 392 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 WDTC1Q8N5D0 677 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 EFHBQ8N7U6 833 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 ATAD1Q8NBU5 361 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 KREMEN2Q8NCW0 462 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 CASP10Q92851 521 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 TRIM11Q96F44 468 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 TRMT2BQ96GJ1 504 aaKnown RBP11.9□□□□□ -0.5
FOXN3-212ENST00000556541 MYRFLQ96LU7 910 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 EIF3CQ99613 913 aaKnown RBP11.9□□□□□ -0.5
FOXN3-212ENST00000556541 CHP1Q99653 195 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 MED10Q9BTT4 135 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 TTLL2Q9BWV7 592 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 TLE6Q9H808 572 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 ABI2Q9NYB9 513 aaPredicted RBP11.9□□□□□ -0.5
FOXN3-212ENST00000556541 NAGPAQ9UK23 515 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 INSL5Q9Y5Q6 135 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 MTCH2Q9Y6C9 303 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 USP3Q9Y6I4 520 aa11.9□□□□□ -0.5
FOXN3-212ENST00000556541 OBSL1O75147 1896 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 MYO16Q9Y6X6 1858 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 SOBPA7XYQ1 873 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 CLDN5O00501 218 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
FOXN3-212ENST00000556541 ZMYND10O75800 440 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 FBXO21O94952 628 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-212ENST00000556541 SEC24AO95486 1093 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 PLEKP08567 350 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-212ENST00000556541 SRGAP2BP0DMP2 458 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 MYBL1P10243 752 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 SKILP12757 684 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 MMP8P22894 467 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 CYP2F1P24903 491 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 ADORA2BP29275 332 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 KIF11P52732 1056 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 DUSP4Q13115 394 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 PDCLQ13371 301 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 GRIN2CQ14957 1233 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 LIN9Q5TKA1 542 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 PM20D1Q6GTS8 502 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 ACAD10Q6JQN1 1059 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 DENND1BQ6P3S1 775 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 BEND5Q7L4P6 421 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 ARCQ7LC44 396 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 ITIH5Q86UX2 942 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 GLYCTKQ8IVS8 523 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 TXLNBQ8N3L3 684 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 ZNF276Q8N554 614 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 LEMD2Q8NC56 503 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 C1orf131Q8NDD1 294 aaKnown RBP11.89□□□□□ -0.51
FOXN3-212ENST00000556541 OVCA2Q8WZ82 227 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 IRGQQ8WZA9 623 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 SECISBP2LQ93073 1101 aaKnown RBP11.89□□□□□ -0.51
FOXN3-212ENST00000556541 PCDHB18PQ96TA0 734 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 LPIN3Q9BQK8 851 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 PDCL3Q9H2J4 239 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 CRISPLD1Q9H336 500 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 DEF6Q9H4E7 631 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 FBXO44Q9H4M3 255 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 LUC7LQ9NQ29 371 aaKnown RBP11.89□□□□□ -0.51
FOXN3-212ENST00000556541 AVENQ9NQS1 362 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-212ENST00000556541 CNGB3Q9NQW8 809 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 TMEM30AQ9NV96 361 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 ASNSD1Q9NWL6 643 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 WDR35Q9P2L0 1181 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 ADAMTS1Q9UHI8 967 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 STRIP2Q9ULQ0 834 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 YIPF1Q9Y548 306 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 HCFC2Q9Y5Z7 792 aa11.89□□□□□ -0.51
FOXN3-212ENST00000556541 EPN1Q9Y6I3 576 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-212ENST00000556541 A0A087X0T9 212 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 F8VP50 259 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 PRRG1O14668 218 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 AKR1B10O60218 316 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 NDUFA10O95299 355 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 CALB1P05937 261 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 GLI1P08151 1106 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 FAM228BP0C875 321 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 CSH1P0DML2 217 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 CSH2P0DML3 217 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 HOXB8P17481 243 aaPredicted RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 GRIK1P39086 918 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 NSFP46459 744 aaKnown RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 ALDH1A3P47895 512 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 PPP3CCP48454 512 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 EPHA5P54756 1037 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 ARPP19P56211 112 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 CCZ1BP86790 482 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 CCZ1P86791 482 aaPredicted RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 GOLGA8FQ08AF8 430 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 GOLGA8DPQ0D2H9 430 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms