RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CEBPBP17676 345 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 CD58P19256 250 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 RAD23BP54727 409 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 CYP27A1Q02318 531 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 MTMR3Q13615 1198 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 MAN2A1Q16706 1144 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 TPD52L1Q16890 204 aaPredicted RBP10.26□□□□□ -0.77
SRP54-210ENST00000556380 CYP4A22Q5TCH4 519 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 PHLDB3Q6NSJ2 640 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 GET4Q7L5D6 327 aaPredicted RBP10.26□□□□□ -0.77
SRP54-210ENST00000556380 TMEM150AQ86TG1 271 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 ITIH5Q86UX2 942 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 TTC39CQ8N584 583 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 C12orf29Q8N999 325 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 SLC4A11Q8NBS3 891 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 GPR152Q8TDT2 470 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 KAT5Q92993 513 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 ACSF2Q96CM8 615 aaPredicted RBP10.26□□□□□ -0.77
SRP54-210ENST00000556380 CEP295NLQ96MC4 621 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 ZSWIM3Q96MP5 696 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 KREMEN1Q96MU8 473 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 HNRNPABQ99729 332 aaKnown RBP10.26□□□□□ -0.77
SRP54-210ENST00000556380 NT5C1AQ9BXI3 368 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 INTS2Q9H0H0 1204 aaKnown RBP10.26□□□□□ -0.77
SRP54-210ENST00000556380 ASAH2Q9NR71 780 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 GDE1Q9NZC3 331 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 SLC38A8A6NNN8 435 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 KCNJ18B7U540 433 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 F8VP50 259 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 LETM1O95202 739 aaPredicted RBP10.25□□□□□ -0.77
SRP54-210ENST00000556380 F11P03951 625 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 ASGR2P07307 311 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 CSH1P0DML2 217 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 CSH2P0DML3 217 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 MYL4P12829 197 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 EEF1GP26641 437 aaKnown RBP10.25□□□□□ -0.77
SRP54-210ENST00000556380 GBP2P32456 591 aaPredicted RBP10.25□□□□□ -0.77
SRP54-210ENST00000556380 MTIF2P46199 727 aaKnown RBP10.25□□□□□ -0.77
SRP54-210ENST00000556380 GCNT1Q02742 428 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 CETN1Q12798 172 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 LRMPQ12912 555 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 HTR4Q13639 388 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 KCNJ12Q14500 433 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 VWA3BQ502W6 1294 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 HSP90AA4PQ58FG1 418 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 TCP11X2Q5H9J9 407 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 PDZD4Q76G19 769 aaPredicted RBP10.25□□□□□ -0.77
SRP54-210ENST00000556380 FAM35AQ86V20 835 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 ARHGEF19Q8IW93 802 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 FAM114A1Q8IWE2 563 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 SCN4BQ8IWT1 228 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 STKLD1Q8NE28 680 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 ZMIZ2Q8NF64 920 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 SLC2A14Q8TDB8 520 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 ING5Q8WYH8 240 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 MCRS1Q96EZ8 462 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 TRMT2BQ96GJ1 504 aaKnown RBP10.25□□□□□ -0.77
SRP54-210ENST00000556380 NT5C1BQ96P26 610 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 BPIFA3Q9BQP9 254 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 TUBGCP2Q9BSJ2 902 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 CRACR2AQ9BSW2 395 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 RPP25Q9BUL9 199 aaKnown RBP10.25□□□□□ -0.77
SRP54-210ENST00000556380 TTLL2Q9BWV7 592 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 NDST4Q9H3R1 872 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 KCNK12Q9HB15 430 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 CSNK1G1Q9HCP0 422 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 FANCLQ9NW38 375 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 IL37Q9NZH6 218 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 MUTYHQ9UIF7 546 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 CNTN6Q9UQ52 1028 aa10.25□□□□□ -0.77
SRP54-210ENST00000556380 A0A1W2PRU2 124 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 LRRC10BA6NIK2 292 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 RNF225M0QZC1 329 aaPredicted RBP10.24□□□□□ -0.77
SRP54-210ENST00000556380 TNFRSF10BO14763 440 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 TRIM66O15016 1216 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 DCXO43602 365 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 BEST1O76090 585 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 CLSTN1O94985 981 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 CCDC130P13994 396 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 GJA1P17302 382 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 SLC9A1P19634 815 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 FCARP24071 287 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 TBXAS1P24557 533 aaPredicted RBP10.24□□□□□ -0.77
SRP54-210ENST00000556380 PON1P27169 355 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 GABRR2P28476 465 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 WEE1P30291 646 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 GRIK1P39086 918 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 ZNF132P52740 706 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 USP46P62068 366 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 MYL5Q02045 173 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 KCNMA1Q12791 1236 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 VEPH1Q14D04 833 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 TEAD2Q15562 447 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 PTPN21Q16825 1174 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 ANO6Q4KMQ2 910 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 FAM78AQ5JUQ0 283 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 TRIM65Q6PJ69 517 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 PARM1Q6UWI2 310 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 GBP6Q6ZN66 633 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 RRAGAQ7L523 313 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms