RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 KAT5Q92993 513 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 MRPL44Q9H9J2 332 aaKnown RBP4.05□□□□□ -1.76
SRP54-207ENST00000555535 TMEM184CQ9NVA4 438 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 GABRQQ9UN88 632 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 PCDHGA9Q9Y5G4 932 aaKnown RBP4.05□□□□□ -1.76
SRP54-207ENST00000555535 PCDHGA8Q9Y5G5 932 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 PCDHGA7Q9Y5G6 932 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 PCDHGA6Q9Y5G7 932 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 PCDHGA3Q9Y5H0 932 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 A1L4Q6 167 aa4.04□□□□□ -1.76
SRP54-207ENST00000555535 PRSS29PA6NIE9 313 aa4.04□□□□□ -1.76
SRP54-207ENST00000555535 FOXN3O00409 490 aaPredicted RBP4.04□□□□□ -1.76
SRP54-207ENST00000555535 GCATO75600 419 aa4.04□□□□□ -1.76
SRP54-207ENST00000555535 CYP19A1P11511 503 aaPredicted RBP4.04□□□□□ -1.76
SRP54-207ENST00000555535 PHKG2P15735 406 aa4.04□□□□□ -1.76
SRP54-207ENST00000555535 CHRM3P20309 590 aa4.04□□□□□ -1.76
SRP54-207ENST00000555535 L1TD1Q5T7N2 865 aaKnown RBP4.04□□□□□ -1.76
SRP54-207ENST00000555535 C1orf162Q8NEQ5 155 aaPredicted RBP4.04□□□□□ -1.76
SRP54-207ENST00000555535 ATL2Q8NHH9 583 aa4.04□□□□□ -1.76
SRP54-207ENST00000555535 CLPTM1LQ96KA5 538 aa4.04□□□□□ -1.76
SRP54-207ENST00000555535 CCDC17Q96LX7 622 aa4.04□□□□□ -1.76
SRP54-207ENST00000555535 CCDC154A6NI56 674 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 F2RL2O00254 374 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 LINC01565O15544 149 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 VPS4BO75351 444 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 CTSAP10619 480 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 MYCLP12524 364 aaPredicted RBP4.03□□□□□ -1.76
SRP54-207ENST00000555535 THBS4P35443 961 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 ACAP2Q15057 778 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 ZNF324BQ6AW86 544 aaPredicted RBP4.03□□□□□ -1.76
SRP54-207ENST00000555535 PPP1R32Q7Z5V6 425 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 SLC15A3Q8IY34 581 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 XAGE5Q8WWM1 108 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 GLG1Q92896 1179 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 FAXDC2Q96IV6 333 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 ZNF479Q96JC4 524 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 SERPINB13Q9UIV8 391 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 MAFFQ9ULX9 164 aa4.03□□□□□ -1.76
SRP54-207ENST00000555535 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 TNFRSF13BO14836 293 aaPredicted RBP4.02□□□□□ -1.77
SRP54-207ENST00000555535 MT-CO1P00395 513 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 RARBP10826 455 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 FGF3P11487 239 aaPredicted RBP4.02□□□□□ -1.77
SRP54-207ENST00000555535 TOB1P50616 345 aaPredicted RBP4.02□□□□□ -1.77
SRP54-207ENST00000555535 ALDH5A1P51649 535 aaPredicted RBP4.02□□□□□ -1.77
SRP54-207ENST00000555535 PGGT1BP53609 377 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 SLC16A1P53985 500 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 SNAPC2Q13487 334 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 LAYNQ6UX15 382 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 UBE2Q1Q7Z7E8 422 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 MAP4K1Q92918 833 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 COA7Q96BR5 231 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 R3HDM4Q96D70 268 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 VRK1Q99986 396 aaPredicted RBP4.02□□□□□ -1.77
SRP54-207ENST00000555535 SLC5A4Q9NY91 659 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 SERTAD3Q9UJW9 196 aa4.02□□□□□ -1.77
SRP54-207ENST00000555535 IGLV5-39A0A0G2JS06 123 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 NT5C1B-RDH14C9J2C7 533 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 PDE8BO95263 885 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 MALP21145 153 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 DSC2Q02487 901 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 CFHR1Q03591 330 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 INPP5JQ15735 1006 aaPredicted RBP4.01□□□□□ -1.77
SRP54-207ENST00000555535 KRT71Q3SY84 523 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 KHDC1Q4VXA5 237 aaKnown RBP4.01□□□□□ -1.77
SRP54-207ENST00000555535 DDX42Q86XP3 938 aaKnown RBP eCLIP4.01□□□□□ -1.77
SRP54-207ENST00000555535 LIX1LQ8IVB5 337 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.01□□□□□ -1.77
SRP54-207ENST00000555535 NSUN6Q8TEA1 469 aaKnown RBP4.01□□□□□ -1.77
SRP54-207ENST00000555535 ATG4AQ8WYN0 398 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 NLRP4Q96MN2 994 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 LENG8Q96PV6 779 aaPredicted RBP4.01□□□□□ -1.77
SRP54-207ENST00000555535 PTDSS2Q9BVG9 487 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 ZBTB40Q9NUA8 1239 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 MKS1Q9NXB0 559 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 AGAP1Q9UPQ3 857 aa4.01□□□□□ -1.77
SRP54-207ENST00000555535 KLHL33A6NCF5 533 aa4□□□□□ -1.77
SRP54-207ENST00000555535 KIF20AO95235 890 aa4□□□□□ -1.77
SRP54-207ENST00000555535 GNAI2P04899 355 aa4□□□□□ -1.77
SRP54-207ENST00000555535 ATXN1LP0C7T5 689 aaKnown RBP4□□□□□ -1.77
SRP54-207ENST00000555535 KCNJ4P48050 445 aa4□□□□□ -1.77
SRP54-207ENST00000555535 LOXL3P58215 753 aa4□□□□□ -1.77
SRP54-207ENST00000555535 KIF23Q02241 960 aaPredicted RBP4□□□□□ -1.77
SRP54-207ENST00000555535 OTUD3Q5T2D3 398 aaPredicted RBP4□□□□□ -1.77
SRP54-207ENST00000555535 BCDIN3DQ7Z5W3 292 aaKnown RBP4□□□□□ -1.77
SRP54-207ENST00000555535 NR2C2APQ86WQ0 139 aa4□□□□□ -1.77
SRP54-207ENST00000555535 SFTPA1Q8IWL2 248 aa4□□□□□ -1.77
SRP54-207ENST00000555535 PNISRQ8TF01 805 aaKnown RBP4□□□□□ -1.77
SRP54-207ENST00000555535 LMLNQ96KR4 655 aa4□□□□□ -1.77
SRP54-207ENST00000555535 MMS19Q96T76 1030 aa4□□□□□ -1.77
SRP54-207ENST00000555535 PUS7LQ9H0K6 701 aaKnown RBP4□□□□□ -1.77
SRP54-207ENST00000555535 TMA7Q9Y2S6 64 aaKnown RBP4□□□□□ -1.77
SRP54-207ENST00000555535 LRRC14BA6NHZ5 514 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 CGAP01215 116 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 FTH1P19P0C7X4 201 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 PHKA1P46020 1223 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 MTX1Q13505 466 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 PCBP2Q15366 365 aaKnown RBP eCLIP3.99□□□□□ -1.77
SRP54-207ENST00000555535 ABCB5Q2M3G0 1257 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 FAM160B1Q5W0V3 765 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms