RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 RUBCNQ92622 972 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 TRMT2BQ96GJ1 504 aaKnown RBP13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 IPO9Q96P70 1041 aaKnown RBP13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 FAM83CQ9BQN1 747 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 HPS4Q9NQG7 708 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 C2orf42Q9NWW7 574 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 ZMYM5Q9UJ78 669 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 TRAF3IP3Q9Y228 551 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 PCDHGA2Q9Y5H1 932 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 F5P12259 2224 aa13.11□□□□□ -0.31
CCDC85C-202ENST00000554877 OTOL1A6NHN0 477 aaPredicted RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 KRT13P13646 458 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 BMP6P22004 513 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 PIK3CAP42336 1068 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 PXNP49023 591 aaPredicted RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 GALK1P51570 392 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 VAMP7P51809 220 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 AP3M2P53677 418 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 NRLP54845 237 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 DMWDQ09019 674 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 GRSF1Q12849 480 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 TAF10Q12962 218 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 SRSF5Q13243 272 aaKnown RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 ADAM9Q13443 819 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 MTF1Q14872 753 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 SGSM1Q2NKQ1 1148 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 WDR44Q5JSH3 913 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 NAIF1Q69YI7 327 aaPredicted RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 SMYD4Q8IYR2 804 aaPredicted RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 GUF1Q8N442 669 aaKnown RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 SPEM1Q8N4L4 309 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 ERCC4Q92889 916 aaPredicted RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 CHFRQ96EP1 664 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 MSANTD3Q96H12 275 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 MYRFLQ96LU7 910 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 KCNK16Q96T55 309 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 SDCBP2Q9H190 292 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 XYLT2Q9H1B5 865 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 PRMT8Q9NR22 394 aaPredicted RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 RAB23Q9ULC3 237 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 RIF1Q5UIP0 2472 aaKnown RBP13.1□□□□□ -0.31
CCDC85C-202ENST00000554877 EGFP01133 1207 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 HLA-DRAP01903 254 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 MBL2P11226 248 aaPredicted RBP13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 P4HA1P13674 534 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 NR2F2P24468 414 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 YWHAQP27348 245 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 ADORA2BP29275 332 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 ID4P47928 161 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 GCLMP48507 274 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 MLLT6P55198 1093 aaPredicted RBP13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 UBE2HP62256 183 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 CLDN10P78369 228 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 PDGFRLQ15198 375 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 C1orf228Q6PIY5 440 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 SV2AQ7L0J3 742 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 ZC3H3Q8IXZ2 948 aaKnown RBP13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 CPA6Q8N4T0 437 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 SUMF1Q8NBK3 374 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 TMC2Q8TDI7 906 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 FBXO32Q969P5 355 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 C8orf48Q96LL4 319 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 RNF38Q9H0F5 515 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 ECT2Q9H8V3 914 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 FBRSL1Q9HCM7 1045 aaKnown RBP13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 FAM49BQ9NUQ9 324 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
CCDC85C-202ENST00000554877 ZNF840PA6NDX5 716 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 LEFTY2O00292 366 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 AP1G2O75843 785 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 FAM163BP0C2L3 166 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 CCDC130P13994 396 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 CD58P19256 250 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 RPL13P26373 211 aaKnown RBP13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 GJA4P35212 333 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 NDST1P52848 882 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 AMPD2Q01433 879 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 NR1H3Q13133 447 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 ZNF268Q14587 947 aaPredicted RBP13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 C1orf220Q5T0J3 134 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 ISM2Q6H9L7 571 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 FSTL4Q6MZW2 842 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 CEP68Q76N32 757 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 NUP93Q8N1F7 819 aa13.08□□□□□ -0.32
CCDC85C-202ENST00000554877 ZBTB44Q8NCP5 570 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms