RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CDR1P51861 262 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 PSMC1P62191 440 aaKnown RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 TNNC1P63316 161 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 SLC7A9P82251 487 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 TRPC3Q13507 836 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CUL4BQ13620 913 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 SIM2Q14190 667 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 KCNB1Q14721 858 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CCDC142Q17RM4 750 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 EML3Q32P44 896 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 WDR72Q3MJ13 1102 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 FSTL4Q6MZW2 842 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 DGLUCYQ7Z3D6 616 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 SCN4BQ8IWT1 228 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 NELFCDQ8IXH7 590 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CEP57L1Q8IYX8 460 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CPA6Q8N4T0 437 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 RDH13Q8NBN7 331 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 STKLD1Q8NE28 680 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CCDC26Q8TAB7 109 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 RIN3Q8TB24 985 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 OVCA2Q8WZ82 227 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 ZNF516Q92618 1163 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CCDC127Q96BQ5 260 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 PCED1BQ96HM7 432 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 SLC22A12Q96S37 553 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 MMS19Q96T76 1030 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 MRPL45Q9BRJ2 306 aaKnown RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 ELOVL4Q9GZR5 314 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 XYLT2Q9H1B5 865 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 SNX25Q9H3E2 840 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 EBF3Q9H4W6 596 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 ECT2Q9H8V3 914 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 SLC39A2Q9NP94 309 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 DMAC2Q9NW81 257 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 DUS2Q9NX74 493 aaKnown RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 TRPM5Q9NZQ8 1165 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 NME7Q9Y5B8 376 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 TNRC6BQ9UPQ9 1833 aaKnown RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 TPRP12270 2363 aaKnown RBP7.04□□□□□ -1.28
SLIRP-203ENST00000554074 FAM237AA0A1B0GTK4 181 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 C2orf78A6NCI8 922 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 ZNF840PA6NDX5 716 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 F8VP50 259 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 PDXKO00764 312 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 IKBKBO14920 756 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 HRO43593 1189 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 NFATC1O95644 943 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 RPN1P04843 607 aaKnown RBP7.04□□□□□ -1.28
SLIRP-203ENST00000554074 PDGFRBP09619 1106 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 ARSAP15289 507 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 PTPN1P18031 435 aaKnown RBP7.04□□□□□ -1.28
SLIRP-203ENST00000554074 CASP1P29466 404 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 GJA4P35212 333 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 AFMP43652 599 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 IFNAR2P48551 515 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 FNTBP49356 437 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 MYL6P60660 151 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 CYP27A1Q02318 531 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 DNM1Q05193 864 aaKnown RBP7.04□□□□□ -1.28
SLIRP-203ENST00000554074 ENPEPQ07075 957 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 STK4Q13043 487 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 NR1H3Q13133 447 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 PKP1Q13835 747 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 NFIL3Q16649 462 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 RSPO4Q2I0M5 234 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-203ENST00000554074 ZACNQ401N2 412 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 MDH1BQ5I0G3 518 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 TDRD10Q5VZ19 366 aaKnown RBP7.04□□□□□ -1.28
SLIRP-203ENST00000554074 TRIM68Q6AZZ1 485 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 CAMKK1Q8N5S9 505 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 ARL14EPQ8N8R7 260 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-203ENST00000554074 B3GALNT2Q8NCR0 500 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 KIAA0895Q8NCT3 520 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 PDZD8Q8NEN9 1154 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 OR6B3Q8NGW1 331 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 TTC8Q8TAM2 541 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 TMC2Q8TDI7 906 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 SH3RF2Q8TEC5 729 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 PARD3BQ8TEW8 1205 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 TAF4BQ92750 862 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 PAGE5Q96GU1 130 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 LOXL4Q96JB6 756 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 SLITRK1Q96PX8 696 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 CYP2S1Q96SQ9 504 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 DUSP9Q99956 384 aaKnown RBP7.04□□□□□ -1.28
SLIRP-203ENST00000554074 P2RY13Q9BPV8 354 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 RTKNQ9BST9 563 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 BLZF1Q9H2G9 400 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 KCTD10Q9H3F6 313 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 TRPC7Q9HCX4 862 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 EXOC1Q9NV70 894 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 COMMD8Q9NX08 183 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 SERTAD1Q9UHV2 236 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 HPSEQ9Y251 543 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 NCOR2Q9Y618 2525 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 GON4LQ3T8J9 2241 aa7.04□□□□□ -1.28
SLIRP-203ENST00000554074 ATP8B3O60423 1300 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 FAM92AA1XBS5 289 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 LRRIQ3A6PVS8 624 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms