RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 YAF2Q8IY57 180 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 BICD2Q8TD16 824 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 CCDC12Q8WUD4 166 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-224ENST00000554040 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 RWDD1Q9H446 243 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-224ENST00000554040 TMEM9BQ9NQ34 198 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 SLC8A2Q9UPR5 921 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 ITPR1Q14643 2758 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 NCANO14594 1321 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 CYP3A7-CYP3A51PA0A087WV96 503 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 LNP1A1A4G5 178 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 TMEM189-UBE2V1I3L0A0 370 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 PRRG1O14668 218 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 PTGESO14684 152 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 DKC1O60832 514 aaKnown RBP eCLIP7.55□□□□□ -1.2
ATXN3-224ENST00000554040 ATG13O75143 517 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 B3GAT3O94766 335 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 SEC24AO95486 1093 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 PRNPP04156 253 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 GSPT1P15170 499 aaKnown RBP7.55□□□□□ -1.2
ATXN3-224ENST00000554040 ATF2P15336 505 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 CYP3A7P24462 503 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 SERPINB4P48594 390 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 EPHA5P54756 1037 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 ELF2Q15723 593 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 NAB2Q15742 525 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 IQCEQ6IPM2 695 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 SLC8B1Q6J4K2 584 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 PKN3Q6P5Z2 889 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 PAOXQ6QHF9 649 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 CD300LGQ6UXG3 332 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 ZAR1Q86SH2 424 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 CDR2LQ86X02 465 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-224ENST00000554040 TCEAL8Q8IYN2 117 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 CAMKK1Q8N5S9 505 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 DEFB124Q8NES8 71 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 TTC8Q8TAM2 541 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 RSPRY1Q96DX4 576 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 ZNF512Q96ME7 567 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-224ENST00000554040 BBC3Q96PG8 261 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-224ENST00000554040 OSBPL1AQ9BXW6 950 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 CYP4F11Q9HBI6 524 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 KLK13Q9UKR3 277 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 BRPF3Q9ULD4 1205 aa7.55□□□□□ -1.2
ATXN3-224ENST00000554040 ABCA7Q8IZY2 2146 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 EIF4E1BA6NMX2 242 aaKnown RBP7.54□□□□□ -1.2
ATXN3-224ENST00000554040 SLC27A2O14975 620 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 DCLK1O15075 740 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 B4GALT5O43286 388 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 TRAPPC3O43617 180 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 B3GALT4O96024 378 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 IGHDP01880 384 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 P4HBP07237 508 aaKnown RBP7.54□□□□□ -1.2
ATXN3-224ENST00000554040 GJA1P17302 382 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 IGFBP6P24592 240 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-224ENST00000554040 TKTP29401 623 aaKnown RBP7.54□□□□□ -1.2
ATXN3-224ENST00000554040 FGD1P98174 961 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 ROR1Q01973 937 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 TFDP1Q14186 410 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 EMC2Q15006 297 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 TEAD2Q15562 447 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 COL28A1Q2UY09 1125 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 UAP1L1Q3KQV9 507 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 OTUD6AQ7L8S5 288 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 HOMEZQ8IX15 550 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 C4orf19Q8IY42 314 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 ELMOD1Q8N336 334 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 LEMD2Q8NC56 503 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 ETNPPLQ8TBG4 499 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 TBCKQ8TEA7 893 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 LRRC3BQ96PB8 259 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 TMEM209Q96SK2 561 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 NFKBIZQ9BYH8 718 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 CXCL16Q9H2A7 254 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 GSX1Q9H4S2 264 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-224ENST00000554040 SLC32A1Q9H598 525 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 ASAH2Q9NR71 780 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 SNTG2Q9NY99 539 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 GTSE1Q9NYZ3 720 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 CEP72Q9P209 647 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 WRAP73Q9P2S5 460 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-224ENST00000554040 INSL5Q9Y5Q6 135 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 SPTA1P02549 2419 aa7.54□□□□□ -1.2
ATXN3-224ENST00000554040 MYO18BQ8IUG5 2567 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 GOLGA8AA7E2F4 631 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 GOLGA8BA8MQT2 603 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 H0Y626 953 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 MEFVO15553 781 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-224ENST00000554040 PRPF3O43395 683 aaKnown RBP7.53□□□□□ -1.2
ATXN3-224ENST00000554040 TRIM16O95361 564 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 TDP2O95551 362 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 MYL4P12829 197 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 ITPKAP23677 461 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 YWHABP31946 246 aaKnown RBP7.53□□□□□ -1.2
ATXN3-224ENST00000554040 ARL2P36404 184 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 RCAN1P53805 252 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 ARPP19P56211 112 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 IRX4P78413 519 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 EXOSC10Q01780 885 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms