RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 QRICH1Q2TAL8 776 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 TRMT10BQ6PF06 316 aaKnown RBP5.35□□□□□ -1.55
ATXN3-222ENST00000553570 RNF207Q6ZRF8 634 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 LGI4Q8N135 537 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 KLHL36Q8N4N3 616 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 C7orf31Q8N865 590 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 TBC1D5Q92609 795 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 RRP36Q96EU6 259 aaKnown RBP5.35□□□□□ -1.55
ATXN3-222ENST00000553570 MAML3Q96JK9 1138 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 ZNF333Q96JL9 665 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 TUBGCP5Q96RT8 1024 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 PIGSQ96S52 555 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 FOXB1Q99853 325 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 ANO3Q9BYT9 981 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 SLC13A1Q9BZW2 595 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.35□□□□□ -1.551e-11■■■■□ 25.2
ATXN3-222ENST00000553570 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 JMJD4Q9H9V9 463 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 LY9Q9HBG7 655 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 PDRG1Q9NUG6 133 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 SEC63Q9UGP8 760 aaKnown RBP5.35□□□□□ -1.55
ATXN3-222ENST00000553570 MAD2L2Q9UI95 211 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 ZFP69BQ9UJL9 534 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 ADAM29Q9UKF5 820 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 ZHX1Q9UKY1 873 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-222ENST00000553570 CNPY2Q9Y2B0 182 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 MRPL11Q9Y3B7 192 aaKnown RBP5.35□□□□□ -1.55
ATXN3-222ENST00000553570 PCDHA1Q9Y5I3 950 aa5.35□□□□□ -1.55
ATXN3-222ENST00000553570 ZNF536O15090 1300 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PRSS38A1L453 326 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 B4DLN1 442 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 SH2B2O14492 632 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 TSPAN6O43657 245 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PCDHGA12O60330 932 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 EIF5BO60841 1220 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PRPF6O94906 941 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 CYP1A1P04798 512 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 GJB1P08034 283 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 RPS6KB1P23443 525 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 HOXA13P31271 388 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 GLRBP48167 497 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 NT5C2P49902 561 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 GNAQP50148 359 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 MRPL12P52815 198 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 OAZ1P54368 228 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 SLC6A3Q01959 620 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 AKAP17AQ02040 695 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ALDH6A1Q02252 535 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 NFATC3Q12968 1075 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PIN1Q13526 163 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 GRB14Q14449 540 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PPP2R5AQ15172 486 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 FSCN1Q16658 493 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ZBTB41Q5SVQ8 909 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 GJC2Q5T442 439 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ARHGEF16Q5VV41 709 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 LRSAM1Q6UWE0 723 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 BTNL9Q6UXG8 535 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 UNQ6494/PRO21346Q6UXR6 183 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ESPNLQ6ZVH7 1005 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 RUFY3Q7L099 469 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ABRAQ8N0Z2 381 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 STPG3Q8N7X2 389 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 REPS2Q8NFH8 660 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 U2AF1L4Q8WU68 220 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 USP6NLQ92738 828 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 CUL5Q93034 780 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 FERMT2Q96AC1 680 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ACAP3Q96P50 834 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 MPHOSPH6Q99547 160 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 UPF3BQ9BZI7 483 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 RANBP17Q9H2T7 1088 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PRDM12Q9H4Q4 367 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 A1CFQ9NQ94 594 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 CCM2LQ9NUG4 571 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ZIM2Q9NZV7 527 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ARHGAP20Q9P2F6 1191 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 ADD3Q9UEY8 706 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PCDHGA9Q9Y5G4 932 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PCDHGA8Q9Y5G5 932 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PCDHGA7Q9Y5G6 932 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PCDHGA6Q9Y5G7 932 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PCDHGA2Q9Y5H1 932 aa5.34□□□□□ -1.55
ATXN3-222ENST00000553570 DDX49Q9Y6V7 483 aaKnown RBP5.34□□□□□ -1.55
ATXN3-222ENST00000553570 PDE4DIPQ5VU43 2346 aa5.34□□□□□ -1.56
ATXN3-222ENST00000553570 PFASO15067 1338 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ABCB11O95342 1321 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ZNF236Q9UL36 1845 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ASB14A6NK59 587 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 CPLX1O14810 134 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ATP2A1O14983 1001 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ZBTB5O15062 677 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 DTNBO60941 627 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ABLIM3O94929 683 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 APOL3O95236 402 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms