RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 OTOGLQ3ZCN5 2332 aa14.94□□□□□ -0.02
DDX54-210ENST00000552375 HELZP42694 1942 aaKnown RBP14.94□□□□□ -0.02
DDX54-210ENST00000552375 ANAPC1Q9H1A4 1944 aa14.94□□□□□ -0.02
DDX54-210ENST00000552375 PDGFRBP09619 1106 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 CTHP32929 405 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 SOX9P48436 509 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 KPNA1P52294 538 aaPredicted RBP14.93□□□□□ -0.02
DDX54-210ENST00000552375 LRRC63Q05C16 580 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 PAK1Q13153 545 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 ZNF268Q14587 947 aaPredicted RBP14.93□□□□□ -0.02
DDX54-210ENST00000552375 ZACNQ401N2 412 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 MDH1BQ5I0G3 518 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 TXNDC8Q6A555 127 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 SV2AQ7L0J3 742 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 MAB21L3Q8N8X9 362 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 MYCBPAPQ8TBZ2 947 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 GPT2Q8TD30 523 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 USP13Q92995 863 aaPredicted RBP14.93□□□□□ -0.02
DDX54-210ENST00000552375 SPATA17Q96L03 361 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 DUSP9Q99956 384 aaKnown RBP14.93□□□□□ -0.02
DDX54-210ENST00000552375 SNX25Q9H3E2 840 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 DPEP3Q9H4B8 488 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 MAGEC2Q9UBF1 373 aaPredicted RBP14.93□□□□□ -0.02
DDX54-210ENST00000552375 CCL26Q9Y258 94 aa14.93□□□□□ -0.02
DDX54-210ENST00000552375 KIF26AQ9ULI4 1882 aaPredicted RBP14.93□□□□□ -0.02
DDX54-210ENST00000552375 MIA3Q5JRA6 1907 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 SPECC1L-ADORA2AF8WAN1 911 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 GOLGA6L22H0YM25 854 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 TRIM66O15016 1216 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 MAPK13O15264 365 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 SLC16A3O15427 465 aaKnown RBP14.92□□□□□ -0.02
DDX54-210ENST00000552375 BDNFP23560 247 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 GNL1P36915 607 aaPredicted RBP14.92□□□□□ -0.02
DDX54-210ENST00000552375 MXI1P50539 228 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 CDH8P55286 799 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 CYP27A1Q02318 531 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 TNK2Q07912 1038 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 MTAPQ13126 283 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 ORC1Q13415 861 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 CCDC40Q4G0X9 1142 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 ZNF667Q5HYK9 610 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 TXNDC11Q6PKC3 985 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 RALGPS2Q86X27 583 aaPredicted RBP14.92□□□□□ -0.02
DDX54-210ENST00000552375 ZC3H3Q8IXZ2 948 aaKnown RBP14.92□□□□□ -0.02
DDX54-210ENST00000552375 OR6B3Q8NGW1 331 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 TAS1R2Q8TE23 839 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 DHTKD1Q96HY7 919 aaPredicted RBP14.92□□□□□ -0.02
DDX54-210ENST00000552375 GTPBP4Q9BZE4 634 aaKnown RBP14.92□□□□□ -0.02
DDX54-210ENST00000552375 SDCBP2Q9H190 292 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 THG1LQ9NWX6 298 aaKnown RBP14.92□□□□□ -0.02
DDX54-210ENST00000552375 GTSE1Q9NYZ3 720 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 TICRRQ7Z2Z1 1910 aa14.92□□□□□ -0.02
DDX54-210ENST00000552375 WDR87Q6ZQQ6 2873 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 ZNF292O60281 2723 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 A8MXQ7 604 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 LMNAP02545 664 aaKnown RBP14.91□□□□□ -0.02
DDX54-210ENST00000552375 CHRNB1P11230 501 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 ANXA13P27216 316 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 FKBP3Q00688 224 aaKnown RBP14.91□□□□□ -0.02
DDX54-210ENST00000552375 CSTF1Q05048 431 aaKnown RBP14.91□□□□□ -0.02
DDX54-210ENST00000552375 USP4Q13107 963 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 LRRC32Q14392 662 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 TTI2Q6NXR4 508 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 DENND5BQ6ZUT9 1274 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 B3GALNT2Q8NCR0 500 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 RIN3Q8TB24 985 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 ELOVL4Q9GZR5 314 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 TRPC7Q9HCX4 862 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 TDP1Q9NUW8 608 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 HMGXB4Q9UGU5 601 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 PCDHGA2Q9Y5H1 932 aa14.91□□□□□ -0.02
DDX54-210ENST00000552375 TRAV19A0A0A6YYK7 116 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 BICDL2A1A5D9 508 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 F8VP50 259 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 CKMP06732 381 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 PTPN1P18031 435 aaKnown RBP14.9□□□□□ -0.02
DDX54-210ENST00000552375 GRIK1P39086 918 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 PPP1R2P41236 205 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 NOP14P78316 857 aaKnown RBP14.9□□□□□ -0.02
DDX54-210ENST00000552375 ITPRIPL2Q3MIP1 535 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 CBWD6Q4V339 395 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 CBWD3Q5JTY5 395 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 CBWD5Q5RIA9 395 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 MAMSTRQ6ZN01 415 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 TRIML1Q8N9V2 468 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 TTC8Q8TAM2 541 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 NELL1Q92832 810 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 C8orf48Q96LL4 319 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 FAM83CQ9BQN1 747 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 TTLL2Q9BWV7 592 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 IMPG2Q9BZV3 1241 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 ZNF518BQ9C0D4 1074 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 LMAN1LQ9HAT1 526 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 APOBEC3GQ9HC16 384 aaKnown RBP14.9□□□□□ -0.02
DDX54-210ENST00000552375 TMEM8AQ9HCN3 771 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 HPS4Q9NQG7 708 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 EHD2Q9NZN4 543 aa14.9□□□□□ -0.02
DDX54-210ENST00000552375 ARMCX3Q9UH62 379 aaPredicted RBP14.9□□□□□ -0.02
DDX54-210ENST00000552375 SPTBN4Q9H254 2564 aa14.89□□□□□ -0.03
DDX54-210ENST00000552375 IKBKBO14920 756 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms