RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 SPTBN2O15020 2390 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 TRAV20A0A0B4J274 112 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ABHD14A-ACY1A0A1B0GW23 586 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 PRAMEF25A6NGN4 478 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ZNF561-AS1K7EIQ3 104 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 WNT9AO14904 365 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 TRIM24O15164 1050 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 KCNAB3O43448 404 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 CIAO1O76071 339 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 SCAF4O95104 1147 aaKnown RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 GH2P01242 217 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 GYPEP15421 78 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 RFX5P48382 616 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 SEC24CP53992 1094 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 BPIFB4P59827 614 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 GSTO1P78417 241 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 GABPAQ06546 454 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 HYAL1Q12794 435 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 FOXI1Q12951 378 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 PICALMQ13492 652 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ACVR2BQ13705 512 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 RASGRF1Q13972 1273 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 RAB33AQ14088 237 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 TMEM132BQ14DG7 1078 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 CCDC144BQ3MJ40 725 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 EPC2Q52LR7 807 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 TCEAL5Q5H9L2 206 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 DCAF17Q5H9S7 520 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 WDR78Q5VTH9 848 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 TMED8Q6PL24 325 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 CXCL17Q6UXB2 119 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ARHGAP36Q6ZRI8 547 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ATG9AQ7Z3C6 839 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 RPAINQ86UA6 219 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 OSTM1Q86WC4 334 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 DZIP1Q86YF9 867 aaKnown RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 CERS3Q8IU89 383 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 CCDC105Q8IYK2 499 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 UBALD2Q8IYN6 164 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 CMTR2Q8IYT2 770 aaKnown RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ANKRD44Q8N8A2 993 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 SUMF1Q8NBK3 374 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ST13P5Q8NFI4 369 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 AFAP1L1Q8TED9 768 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 LINC00476Q8WZB0 136 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 RUBCNQ92622 972 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 CAVIN3Q969G5 261 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 RUNDC1Q96C34 613 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 NSUN4Q96CB9 384 aaKnown RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 FAM193BQ96PV7 902 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 CTAGE1Q96RT6 745 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ZFYVE21Q9BQ24 234 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 PHF7Q9BWX1 381 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 TRPV6Q9H1D0 765 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 RPAP3Q9H6T3 665 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 GNL3LQ9NVN8 582 aaKnown RBP2.77□□□□□ -1.97
PTCH1-223ENST00000551623 PCDHA8Q9Y5H6 950 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ATP23Q9Y6H3 246 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 NAV2Q8IVL1 2488 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 PTPRSQ13332 1948 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 LOC102724159A0A0B4J2E5 919 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 A0A1W2PRG0 241 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 FSD2A1L4K1 749 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 GOLGA8BA8MQT2 603 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 PRR5-ARHGAP8B1AHC4 643 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 EYA2O00167 538 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 ELL2O00472 640 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 VWA5AO00534 786 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 H2AFYO75367 372 aaKnown RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 PDGFBP01127 241 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 IGLV2-14P01704 120 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 RB1P06400 928 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 PGK2P07205 417 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 LDHCP07864 332 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 NBPF7P0C2Y1 421 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 AOC1P19801 751 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 GUCY1A2P33402 732 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 PHKA1P46020 1223 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 SESN2P58004 480 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 DEFB103AP81534 67 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 ARHGAP8P85298 464 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 IFRD2Q12894 506 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 KCNC3Q14003 757 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 PWP2Q15269 919 aaKnown RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 GPR19Q15760 415 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 FSCN1Q16658 493 aaKnown RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 ATP2B3Q16720 1220 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 GAGE13Q4V321 117 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 FIGNQ5HY92 759 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 NFRKBQ6P4R8 1299 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 ATF7IPQ6VMQ6 1270 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 SESTD1Q86VW0 696 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 NOSTRINQ8IVI9 506 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 ARHGEF19Q8IW93 802 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 EFHBQ8N7U6 833 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 CAGE1Q8TC20 777 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 ACER1Q8TDN7 264 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 MORC4Q8TE76 937 aa2.76□□□□□ -1.97
PTCH1-223ENST00000551623 GCDHQ92947 438 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-223ENST00000551623 SUCLG2Q96I99 432 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms