RNA–Protein interactions for RNA: ENST00000550800.6

TMEM116-212, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-212ENST00000550800 NCLNQ969V3 563 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 ATP6V1E2Q96A05 226 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 PBXIP1Q96AQ6 731 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 PDXPQ96GD0 296 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 APOPT1Q96IL0 206 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 TXNDC15Q96J42 360 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 FAM167AQ96KS9 214 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 LRRC37BQ96QE4 947 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 VPS35Q96QK1 796 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 ALPK1Q96QP1 1244 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 PURBQ96QR8 312 aaKnown RBP5.41□□□□□ -1.54
TMEM116-212ENST00000550800 NUP88Q99567 741 aaPredicted RBP5.41□□□□□ -1.54
TMEM116-212ENST00000550800 ECSITQ9BQ95 431 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 ALG1Q9BT22 464 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 CENPOQ9BU64 300 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 C9orf16Q9BUW7 83 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 EDEM3Q9BZQ6 932 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 GRIP2Q9C0E4 1043 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 WDR12Q9GZL7 423 aaKnown RBP5.41□□□□□ -1.54
TMEM116-212ENST00000550800 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.41□□□□□ -1.541e-6■□□□□ 8.8
TMEM116-212ENST00000550800 RBM38Q9H0Z9 239 aaKnown RBP5.41□□□□□ -1.54
TMEM116-212ENST00000550800 TMEM245Q9H330 911 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 PABPC3Q9H361 631 aaKnown RBP5.41□□□□□ -1.54
TMEM116-212ENST00000550800 SNX25Q9H3E2 840 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 MROH8Q9H579 483 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 FANCEQ9HB96 536 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 RC3H2Q9HBD1 1191 aaKnown RBP5.41□□□□□ -1.54
TMEM116-212ENST00000550800 USP29Q9HBJ7 922 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 ATP13A1Q9HD20 1204 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 ATP13A2Q9NQ11 1180 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 WASH6PQ9NQA3 447 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 STARD7Q9NQZ5 370 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 ABCF3Q9NUQ8 709 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 PAG1Q9NWQ8 432 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 ANKMY1Q9P2S6 941 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 CD300AQ9UGN4 299 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 FKBPLQ9UIM3 349 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 CNOT6Q9ULM6 557 aaKnown RBP5.41□□□□□ -1.54
TMEM116-212ENST00000550800 CLEC4AQ9UMR7 237 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 STARD13Q9Y3M8 1113 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 TLL2Q9Y6L7 1015 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 FER1L4A9Z1Z3 1794 aa5.41□□□□□ -1.54
TMEM116-212ENST00000550800 SCN4AP35499 1836 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 TRAV6A0A075B6T7 132 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 A0A0A6YYJ9 748 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 A0A1W2PQC6 194 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 LRRIQ4A6NIV6 560 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 PRSS44E7EML9 344 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 F8W031 263 aaPredicted RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 SLCO1B7G3V0H7 640 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 H0Y858 1186 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 CLOCKO15516 846 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 NUAK1O60285 661 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 RNGTTO60942 597 aaKnown RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 PALMO75781 387 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 PSMG1O95456 288 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 APBB3O95704 486 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 TGM6O95932 706 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 AFPP02771 609 aaKnown RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 SCG2P13521 617 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 KRT15P19012 456 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 MUTP22033 750 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 CMA1P23946 247 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 RFC1P35251 1148 aaPredicted RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 PTPN9P43378 593 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 LIMK1P53667 647 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 AK2P54819 239 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 RNASE9P60153 205 aaKnown RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 EIF4A1P60842 406 aaKnown RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 HAND2P61296 217 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 TSPAN5P62079 268 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 PSMC5P62195 406 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 UBE2IP63279 158 aaKnown RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 STRN3Q13033 797 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 TARDBPQ13148 414 aaKnown RBP eCLIP5.4□□□□□ -1.546e-9■■■■■ 31.8
TMEM116-212ENST00000550800 DHX34Q14147 1143 aaKnown RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 GIT2Q14161 759 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 KCNAB1Q14722 419 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 DNAL1Q4LDG9 190 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 BRDTQ58F21 947 aaPredicted RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 SLC45A4Q5BKX6 768 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 PITRM1Q5JRX3 1037 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 HP1BP3Q5SSJ5 553 aaPredicted RBP5.4□□□□□ -1.54
TMEM116-212ENST00000550800 USPL1Q5W0Q7 1092 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 SLFN13Q68D06 897 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 ELP2Q6IA86 826 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 TTC27Q6P3X3 843 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 KLHDC10Q6PID8 442 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 DCLRE1AQ6PJP8 1040 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 KDELC1Q6UW63 502 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 TMC5Q6UXY8 1006 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 C4orf50Q6ZRC1 276 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 MIGA2Q7L4E1 593 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 VSIG1Q86XK7 387 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 HPS6Q86YV9 775 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 P3H2Q8IVL5 708 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 COLGALT2Q8IYK4 626 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 KIAA2013Q8IYS2 634 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 RCOR2Q8IZ40 523 aa5.4□□□□□ -1.54
TMEM116-212ENST00000550800 IFNL3Q8IZI9 196 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms