RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 EMC2Q15006 297 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 SEPT7Q16181 437 aaKnown RBP10.78□□□□□ -0.68
ERBB3-214ENST00000550070 SMTNL2Q2TAL5 461 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 DSTYKQ6XUX3 929 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 PCGF5Q86SE9 256 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 FAM83AQ86UY5 434 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 SH3TC2Q8TF17 1288 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 UPF1Q92900 1129 aaKnown RBP eCLIP10.78□□□□□ -0.68
ERBB3-214ENST00000550070 MSTO1Q9BUK6 570 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 DCLRE1BQ9H816 532 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 KCNK13Q9HB14 408 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 DDX56Q9NY93 547 aaKnown RBP10.78□□□□□ -0.68
ERBB3-214ENST00000550070 HEY2Q9UBP5 337 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 FETUBQ9UGM5 382 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 FBXO40Q9UH90 709 aa10.78□□□□□ -0.68
ERBB3-214ENST00000550070 FER1L6Q2WGJ9 1857 aa10.77□□□□□ -0.68
ERBB3-214ENST00000550070 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 DPPA5A6NC42 116 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 K7ERI5 159 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 DKC1O60832 514 aaKnown RBP eCLIP10.77□□□□□ -0.69
ERBB3-214ENST00000550070 ITGBL1O95965 494 aaPredicted RBP10.77□□□□□ -0.69
ERBB3-214ENST00000550070 PDHA1P08559 390 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 PCK1P35558 622 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 ACTR2P61160 394 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 KCNT1Q5JUK3 1230 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 FKBP1CQ5VVH2 108 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 ABHD15Q6UXT9 468 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 ARFGAP1Q8N6T3 406 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 PTCD3Q96EY7 689 aaKnown RBP10.77□□□□□ -0.69
ERBB3-214ENST00000550070 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 VPS11Q9H270 941 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 ZWILCHQ9H900 591 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 JPH1Q9HDC5 661 aaPredicted RBP10.77□□□□□ -0.69
ERBB3-214ENST00000550070 STK32BQ9NY57 414 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 SLC9A2Q9UBY0 812 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 RPL26L1Q9UNX3 145 aaKnown RBP10.77□□□□□ -0.69
ERBB3-214ENST00000550070 A0A0B4J269 797 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 LRRIQ4A6NIV6 560 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 E7ESA3 106 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 TM9SF1O15321 606 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 HOXA2O43364 376 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 CST8O60676 142 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 TMEM63AO94886 807 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 PIGRP01833 764 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 HARSP12081 509 aaKnown RBP10.77□□□□□ -0.69
ERBB3-214ENST00000550070 IMPDH2P12268 514 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 ATP4AP20648 1035 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 IL1R2P27930 398 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 TBC1D25Q3MII6 688 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 CMPK2Q5EBM0 449 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 GPAT2Q6NUI2 795 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 UNC45BQ8IWX7 931 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 PALM2Q8IXS6 379 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 NIPA2Q8N8Q9 360 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 ARMC2Q8NEN0 867 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 TFAP2BQ92481 460 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 BTBD10Q9BSF8 475 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 FBXO6Q9NRD1 293 aaPredicted RBP10.77□□□□□ -0.69
ERBB3-214ENST00000550070 RNF146Q9NTX7 359 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 AGTPBP1Q9UPW5 1226 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 ADGRA2Q96PE1 1338 aa10.77□□□□□ -0.69
ERBB3-214ENST00000550070 CARNS1A5YM72 827 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 NDC80O14777 642 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 GSC2O15499 205 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 HAUS5O94927 633 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 LDHAP00338 332 aaKnown RBP10.76□□□□□ -0.69
ERBB3-214ENST00000550070 SERPINB3P29508 390 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 RFC1P35251 1148 aaPredicted RBP10.76□□□□□ -0.69
ERBB3-214ENST00000550070 TNFSF9P41273 254 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 TUBP50607 506 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 NRLP54845 237 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 SLC25A11Q02978 314 aaKnown RBP10.76□□□□□ -0.69
ERBB3-214ENST00000550070 KLHL38Q2WGJ6 581 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 BBS9Q3SYG4 887 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 SLFN12LQ6IEE8 588 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 SAPCD2Q86UD0 394 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 IGDCC3Q8IVU1 814 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 KIAA0319LQ8IZA0 1049 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 TMEM35BQ8NCS4 154 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 DNAJC9Q8WXX5 260 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 ATG4CQ96DT6 458 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 TSSK1BQ9BXA7 367 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 YIPF3Q9GZM5 350 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 RPAP3Q9H6T3 665 aaPredicted RBP10.76□□□□□ -0.69
ERBB3-214ENST00000550070 TJP2Q9UDY2 1190 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 G3BP2Q9UN86 482 aaKnown RBP10.76□□□□□ -0.69
ERBB3-214ENST00000550070 SIP14410 1827 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 C2orf71A6NGG8 1288 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 A6NJR5 290 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 TTLL13PA6NNM8 815 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 VWA5AO00534 786 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 HNRNPCL1O60812 293 aaKnown RBP10.76□□□□□ -0.69
ERBB3-214ENST00000550070 CCDC22O60826 627 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 LSM8O95777 96 aaKnown RBP10.76□□□□□ -0.69
ERBB3-214ENST00000550070 ASS1P00966 412 aaKnown RBP10.76□□□□□ -0.69
ERBB3-214ENST00000550070 CD48P09326 243 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 ACADSP16219 412 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 ARFIP2P53365 341 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 SESN3P58005 492 aa10.76□□□□□ -0.69
ERBB3-214ENST00000550070 MYL6P60660 151 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms