RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 EHD2Q9NZN4 543 aa12.63□□□□□ -0.39
PFDN5-208ENST00000549995 IGSF9Q9P2J2 1179 aa12.63□□□□□ -0.39
PFDN5-208ENST00000549995 MRPS23Q9Y3D9 190 aaKnown RBP12.63□□□□□ -0.39
PFDN5-208ENST00000549995 BECN2A8MW95 431 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 RNF225M0QZC1 329 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-208ENST00000549995 O00370 1275 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 CLDN5O00501 218 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 BEST1O76090 585 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 CLSTN1O94985 981 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 FAM200BP0CF97 657 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 ATP1A3P13637 1013 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 NPR3P17342 541 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 FCARP24071 287 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 ANXA13P27216 316 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 MFAP3P55082 362 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 RAB41Q5JT25 222 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 KLHDC7AQ5VTJ3 777 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 LRSAM1Q6UWE0 723 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 RRAGAQ7L523 313 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 ANKRD52Q8NB46 1076 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 RBBP8NLQ8NC74 664 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-208ENST00000549995 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 ZSWIM1Q9BR11 485 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 GANQ9H2C0 597 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 CBX8Q9HC52 389 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 UBE2TQ9NPD8 197 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-208ENST00000549995 FAM49BQ9NUQ9 324 aa12.62□□□□□ -0.39
PFDN5-208ENST00000549995 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-208ENST00000549995 MYO10Q9HD67 2058 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 A0A1B0GTH6 734 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 AP1G2O75843 785 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 RTN3O95197 1032 aaPredicted RBP12.61□□□□□ -0.39
PFDN5-208ENST00000549995 OLFM2O95897 454 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 ZDHHC11BP0C7U3 371 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 TCF3P15923 654 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 GABRR2P28476 465 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 GRIK1P39086 918 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 PPP3CCP48454 512 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 RPL34P49207 117 aaKnown RBP12.61□□□□□ -0.39
PFDN5-208ENST00000549995 ZNF445P59923 1031 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 USP46P62068 366 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 MTMR3Q13615 1198 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 CNGA2Q16280 664 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 PTPN21Q16825 1174 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 SGO2Q562F6 1265 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 SDHAF4Q5VUM1 108 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 TMEM270Q6UE05 265 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 MTSS1LQ765P7 747 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 TTC30AQ86WT1 665 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 SCN4BQ8IWT1 228 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 NUP93Q8N1F7 819 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 GIPC2Q8TF65 315 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 ASB16Q96NS5 453 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 KCNK16Q96T55 309 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 VPS16Q9H269 839 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 OBP2AQ9NY56 170 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 TSPAN16Q9UKR8 245 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
PFDN5-208ENST00000549995 USP3Q9Y6I4 520 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 COL4A3Q01955 1670 aa12.61□□□□□ -0.39
PFDN5-208ENST00000549995 A0A1W2PRU2 124 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 TNFRSF10AO00220 468 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 ECI2O75521 394 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 TPM2P07951 284 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 SETSIPP0DME0 302 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 MYL4P12829 197 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 UCHL3P15374 230 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 GBP2P32456 591 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-208ENST00000549995 PLA2G4AP47712 749 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 SLC5A3P53794 718 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 BCAT1P54687 386 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 APBA1Q02410 837 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 ZNF268Q14587 947 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-208ENST00000549995 TEAD2Q15562 447 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 ZNF394Q53GI3 561 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 FKBP15Q5T1M5 1219 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 GJB7Q6PEY0 223 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 CREBRFQ8IUR6 639 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 FAM71AQ8IYT1 594 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 SCML4Q8N228 414 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 ZNF276Q8N554 614 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 KIAA1958Q8N8K9 716 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 PDZD8Q8NEN9 1154 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 GPR152Q8TDT2 470 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 TFAP2BQ92481 460 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 ELSPBP1Q96BH3 223 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 HEXIM2Q96MH2 286 aaKnown RBP12.6□□□□□ -0.39
PFDN5-208ENST00000549995 MED10Q9BTT4 135 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 TASP1Q9H6P5 420 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 KCNK12Q9HB15 430 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
PFDN5-208ENST00000549995 DNAJC12Q9UKB3 198 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 SORCS3Q9UPU3 1222 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 PCDHB4Q9Y5E5 795 aa12.6□□□□□ -0.39
PFDN5-208ENST00000549995 TRIOO75962 3097 aa12.59□□□□□ -0.39
PFDN5-208ENST00000549995 A0A1W2PQC6 194 aa12.59□□□□□ -0.39
PFDN5-208ENST00000549995 PI4K2BG5E9Z4 385 aa12.59□□□□□ -0.39
PFDN5-208ENST00000549995 XPO1O14980 1071 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms