RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 BST2Q10589 180 aaKnown RBP24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 ATAT1Q5SQI0 421 aa24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 ZMIZ2Q8NF64 920 aa24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 UBA3Q8TBC4 463 aa24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 NUCKS1Q9H1E3 243 aaKnown RBP24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 MYH10P35580 1976 aa24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 GOLGA6L3A6NEY3 463 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 M0QYV0 167 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 SSTR3P32745 418 aaPredicted RBP24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 KRT9P35527 623 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 ZBED6P86452 979 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 ARID5AQ03989 594 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 MEA1Q16626 185 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 PKDCCQ504Y2 493 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 DENND5BQ6ZUT9 1274 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 DNAJB7Q7Z6W7 309 aaPredicted RBP24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 FEZF2Q8TBJ5 459 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 EPS8L1Q8TE68 723 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 RIPOR3Q96MK2 946 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 PNPLA8Q9NP80 782 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 SPTBN5Q9NRC6 3674 aaKnown RBP24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 SLC38A8A6NNN8 435 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 SETSIPP0DME0 302 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 CASP14P31944 242 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 PDE4CQ08493 712 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 LEXMQ3ZCV2 418 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 SFMBT2Q5VUG0 894 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 TMC6Q7Z403 805 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 GRASPQ7Z6J2 395 aaPredicted RBP24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 GPIHBP1Q8IV16 184 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 CORO1BQ9BR76 489 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 HCFC1R1Q9NWW0 138 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 DNMT3BQ9UBC3 853 aaKnown RBP24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 PCDHGC3Q9UN70 934 aa24.5■■□□□ 1.51
SMARCD1-203ENST00000547247 TPM1P09493 284 aa24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 MTHFRP42898 656 aa24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 SMAD4Q13485 552 aaKnown RBP24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 NOP9Q86U38 636 aaKnown RBP24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 ZNF677Q86XU0 584 aa24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 NUP93Q8N1F7 819 aa24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 STKLD1Q8NE28 680 aa24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 ATXN2LQ8WWM7 1075 aaKnown RBP24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 UBXN6Q9BZV1 441 aa24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 AIPL1Q9NZN9 384 aa24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 CDH22Q9UJ99 828 aa24.49■■□□□ 1.51
SMARCD1-203ENST00000547247 XPO1O14980 1071 aaKnown RBP24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 MTMR3Q13615 1198 aa24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 IRF2BP2Q7Z5L9 587 aa24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 DDX1Q92499 740 aaKnown RBP24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 PDCL3Q9H2J4 239 aa24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 ASAH2Q9NR71 780 aa24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 EHD2Q9NZN4 543 aa24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 MAGED2Q9UNF1 606 aaPredicted RBP24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 USP15Q9Y4E8 981 aaPredicted RBP24.48■■□□□ 1.51
SMARCD1-203ENST00000547247 HHLA1C9JL84 531 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 MBTPS2O43462 519 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 ADCY5O95622 1261 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 RHOP08100 348 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 CFHP08603 1231 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 HMGA1P17096 107 aaKnown RBP24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 SLC5A3P53794 718 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 ASIC2Q16515 512 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 PABPC1LQ4VXU2 614 aaKnown RBP24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 CYP4A22Q5TCH4 519 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 TAF3Q5VWG9 929 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 PIGZQ86VD9 579 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 HS6ST3Q8IZP7 471 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 LEMD2Q8NC56 503 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 SLC35F5Q8WV83 523 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 SYN2Q92777 582 aaPredicted RBP24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 SECISBP2LQ93073 1101 aaKnown RBP24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 NECTIN4Q96NY8 510 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 GRPEL1Q9HAV7 217 aa24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 UXTQ9UBK9 157 aaPredicted RBP24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 NOCTQ9UK39 431 aaKnown RBP24.47■■□□□ 1.51
SMARCD1-203ENST00000547247 GRXCR2A6NFK2 248 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 TNFRSF10BO14763 440 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 RTN3O95197 1032 aaPredicted RBP24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 GPD2P43304 727 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 PLA2G4AP47712 749 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 EPHA5P54756 1037 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 MRPS5P82675 430 aaKnown RBP24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 AAK1Q2M2I8 961 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 DENND1BQ6P3S1 775 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 SUSD6Q92537 303 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 TRMT2BQ96GJ1 504 aaKnown RBP24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 MYRFLQ96LU7 910 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 LRRC3Q9BY71 257 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 LHX5Q9H2C1 402 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 WDR6Q9NNW5 1121 aaKnown RBP24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 CEP83Q9Y592 693 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 C2orf16Q68DN1 1984 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 TULP2O00295 520 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 NTHL1P78549 312 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 CDR2Q01850 454 aa24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 TBX2Q13207 712 aaPredicted RBP24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 CBX2Q14781 532 aaPredicted RBP24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 PUS10Q3MIT2 529 aaKnown RBP24.46■■□□□ 1.51
SMARCD1-203ENST00000547247 PDZD4Q76G19 769 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms