RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 TNKS2Q9H2K2 1166 aa7.37□□□□□ -1.23
CCDC60-205ENST00000546345 PLEKHA4Q9H4M7 779 aa7.37□□□□□ -1.23
CCDC60-205ENST00000546345 HCFC1R1Q9NWW0 138 aa7.37□□□□□ -1.23
CCDC60-205ENST00000546345 KLK13Q9UKR3 277 aa7.37□□□□□ -1.23
CCDC60-205ENST00000546345 R3HCC1Q9Y3T6 440 aaKnown RBP7.37□□□□□ -1.23
CCDC60-205ENST00000546345 PTPRQQ9UMZ3 2332 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 ANK1P16157 1881 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 GON4LQ3T8J9 2241 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 DDX39AO00148 427 aaKnown RBP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 NCAM2O15394 837 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 C1QL1O75973 258 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 CHRNB1P11230 501 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 CCNFP41002 786 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 NT5C2P49902 561 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 DSC1Q08554 894 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 TROAPQ12815 778 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 NKPD1Q17RQ9 610 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 SLC5A9Q2M3M2 681 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 COL28A1Q2UY09 1125 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 HEATR6Q6AI08 1181 aaKnown RBP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 CAVIN1Q6NZI2 390 aaKnown RBP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 C19orf48Q6RUI8 117 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 CASC1Q6TDU7 716 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 CCDC81Q6ZN84 652 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 LONP2Q86WA8 852 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 GAS2L3Q86XJ1 694 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 METTL13Q8N6R0 699 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 RBBP8NLQ8NC74 664 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 CPLX3Q8WVH0 158 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 ING5Q8WYH8 240 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 DNASE1L2Q92874 299 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 MXRA8Q9BRK3 442 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 TMEM175Q9BSA9 504 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 EDEM2Q9BV94 578 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 SRRTQ9BXP5 876 aaKnown RBP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 AGO4Q9HCK5 861 aaKnown RBP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 CHST7Q9NS84 486 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 RBM12Q9NTZ6 932 aaKnown RBP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 DACT1Q9NYF0 836 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 VAV3Q9UKW4 847 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 AKT3Q9Y243 479 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 PRG3Q9Y2Y8 225 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-205ENST00000546345 NEUROG3Q9Y4Z2 214 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 COL6A6A6NMZ7 2263 aa7.36□□□□□ -1.23
CCDC60-205ENST00000546345 TP53BP1Q12888 1972 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-205ENST00000546345 SPTA1P02549 2419 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 LNP1A1A4G5 178 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 GOLGA6L6A8MZA4 724 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 ARNTLO00327 626 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 TNFRSF10CO14798 259 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 ZNF623O75123 536 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 ECI2O75521 394 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 UBOX5O94941 541 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 C1RP00736 705 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-205ENST00000546345 CNR2P34972 360 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 MPLP40238 635 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 CXCL12P48061 93 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 CLCN7P51798 805 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 RNASELQ05823 741 aaKnown RBP7.35□□□□□ -1.23
CCDC60-205ENST00000546345 TRAF1Q13077 416 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 ZSCAN23Q3MJ62 389 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 CDKAL1Q5VV42 579 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 KBTBD6Q86V97 674 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 LURAP1LQ8IV03 231 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 COLGALT2Q8IYK4 626 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 RNF141Q8WVD5 230 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 EVI5LQ96CN4 794 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 PGBD1Q96JS3 809 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 HRASLS5Q96KN8 279 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 KREMEN1Q96MU8 473 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 SDF4Q9BRK5 362 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 UBAC1Q9BSL1 405 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 GPR62Q9BZJ7 368 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 LY9Q9HBG7 655 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 ZNF302Q9NR11 478 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 SPTLC3Q9NUV7 552 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 STK39Q9UEW8 545 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 USP25Q9UHP3 1055 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 KCNH3Q9ULD8 1083 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 SLC5A6Q9Y289 635 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 MRPS17Q9Y2R5 130 aaKnown RBP7.35□□□□□ -1.23
CCDC60-205ENST00000546345 CAPN6Q9Y6Q1 641 aa7.35□□□□□ -1.23
CCDC60-205ENST00000546345 COL5A1P20908 1838 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-205ENST00000546345 URB1O60287 2271 aaKnown RBP7.35□□□□□ -1.23
CCDC60-205ENST00000546345 ZNF213O14771 459 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 CCL16O15467 120 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 MAFGO15525 162 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 ADAM12O43184 909 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 CDC45O75419 566 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 POMCP01189 267 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 PRB1P04280 392 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 CEBPBP17676 345 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 POLR2BP30876 1174 aaKnown RBP7.34□□□□□ -1.23
CCDC60-205ENST00000546345 BNIP3Q12983 259 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 RTP2Q5QGT7 225 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 UBXN11Q5T124 520 aa7.34□□□□□ -1.23
CCDC60-205ENST00000546345 FAM160B1Q5W0V3 765 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms