RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ITIH3Q06033 890 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 ZNF252P-AS1Q0IIN9 211 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 CLUL1Q15846 466 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 ERCC6LQ2NKX8 1250 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 OLFML1Q6UWY5 402 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 PIGZQ86VD9 579 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 RHOT1Q8IXI2 618 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 OR10T2Q8NGX3 314 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 SMARCD1Q96GM5 515 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.46■□□□□ 0.872e-6■■■■□ 19.8
SKP2-208ENST00000546211 PLVAPQ9BX97 442 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 MARCH5Q9NX47 278 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 SMARCAL1Q9NZC9 954 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 DYNC1I1O14576 645 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 PAPSS1O43252 624 aaPredicted RBP20.45■□□□□ 0.86
SKP2-208ENST00000546211 PSTPIP1O43586 416 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 BAIAP3O94812 1187 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 MAP3K7CLP57077 242 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 RNASE9P60153 205 aaKnown RBP20.45■□□□□ 0.86
SKP2-208ENST00000546211 WDR5P61964 334 aaKnown RBP20.45■□□□□ 0.86
SKP2-208ENST00000546211 SEL1L2Q5TEA6 688 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 DCAF12L1Q5VU92 463 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 FAM171A1Q5VUB5 890 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 CC2D1AQ6P1N0 951 aaPredicted RBP20.45■□□□□ 0.86
SKP2-208ENST00000546211 SCUBE3Q8IX30 993 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 EMC1Q8N766 993 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 SPATA4Q8NEY3 305 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 KCTD13Q8WZ19 329 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 RNPC3Q96LT9 517 aaKnown RBP20.45■□□□□ 0.86
SKP2-208ENST00000546211 IL23AQ9NPF7 189 aa20.45■□□□□ 0.86
SKP2-208ENST00000546211 LTBP2Q14767 1821 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 GABBR2O75899 941 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 ACRP10323 421 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 SCNN1AP37088 669 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 ALDH7A1P49419 539 aaKnown RBP20.44■□□□□ 0.86
SKP2-208ENST00000546211 NAA30Q147X3 362 aaPredicted RBP20.44■□□□□ 0.86
SKP2-208ENST00000546211 FUT10Q6P4F1 479 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 C4orf50Q6ZRC1 276 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 CEP57Q86XR8 500 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 DCP1BQ8IZD4 617 aaKnown RBP20.44■□□□□ 0.86
SKP2-208ENST00000546211 TMEM209Q96SK2 561 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 NAP1L3Q99457 506 aaPredicted RBP20.44■□□□□ 0.86
SKP2-208ENST00000546211 PKMYT1Q99640 499 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 LRRC4Q9HBW1 653 aa20.44■□□□□ 0.86
SKP2-208ENST00000546211 TTC7AQ9ULT0 858 aaPredicted RBP20.44■□□□□ 0.86
SKP2-208ENST00000546211 FNDC1Q4ZHG4 1894 aaPredicted RBP20.44■□□□□ 0.86
SKP2-208ENST00000546211 NT5C1B-RDH14C9J2C7 533 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 F8VP50 259 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 BEST1O76090 585 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 DESP17661 470 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 GPD1P21695 349 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 CDR1P51861 262 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 DEFB103AP81534 67 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 C2orf54Q08AI8 447 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 ZNF211Q13398 564 aaPredicted RBP20.43■□□□□ 0.86
SKP2-208ENST00000546211 ACAP1Q15027 740 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 VARS2Q5ST30 1063 aaKnown RBP20.43■□□□□ 0.86
SKP2-208ENST00000546211 SPATA2LQ8IUW3 424 aaPredicted RBP20.43■□□□□ 0.86
SKP2-208ENST00000546211 TSC1Q92574 1164 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 PIWIL1Q96J94 861 aaKnown RBP20.43■□□□□ 0.86
SKP2-208ENST00000546211 SMOQ99835 787 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 GPR62Q9BZJ7 368 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 UBXN6Q9BZV1 441 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 ASNSD1Q9NWL6 643 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 TMEM59LQ9UK28 342 aa20.43■□□□□ 0.86
SKP2-208ENST00000546211 KIAA0100Q14667 2235 aaKnown RBP20.43■□□□□ 0.86
SKP2-208ENST00000546211 PDGFRAP16234 1089 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 FGFR3P22607 806 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 PBX3P40426 434 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 ZNF143P52747 638 aaPredicted RBP20.42■□□□□ 0.86
SKP2-208ENST00000546211 TAS2R40P59535 323 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 ADIGQ0VDE8 80 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 PPIGQ13427 754 aaKnown RBP eCLIP20.42■□□□□ 0.86
SKP2-208ENST00000546211 ELF2Q15723 593 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 SPOUT1Q5T280 376 aaKnown RBP20.42■□□□□ 0.86
SKP2-208ENST00000546211 DAB2IPQ5VWQ8 1189 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 ZNF280DQ6N043 979 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 LRRTM3Q86VH5 581 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 SIX6OS1Q8N1H7 587 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 NOA1Q8NC60 698 aaKnown RBP20.42■□□□□ 0.86
SKP2-208ENST00000546211 ZCWPW1Q9H0M4 648 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 CWH43Q9H720 699 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 TMLHEQ9NVH6 421 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 C2CD4BA6NLJ0 364 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 GRAP2O75791 330 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 RNF8O76064 485 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 FGGP02679 453 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 BDNFP23560 247 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 LONRF2Q1L5Z9 754 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 CTXN3Q4LDR2 81 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 EFHC1Q5JVL4 640 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 LRRC38Q5VT99 294 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 FAM117BQ6P1L5 589 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 SLC26A9Q7LBE3 791 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 RXFP2Q8WXD0 754 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 ZNF689Q96CS4 500 aaPredicted RBP20.42■□□□□ 0.86
SKP2-208ENST00000546211 CNPY3Q9BT09 278 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 CSNK1G1Q9HCP0 422 aa20.42■□□□□ 0.86
SKP2-208ENST00000546211 DMAP1Q9NPF5 467 aaPredicted RBP20.42■□□□□ 0.86
SKP2-208ENST00000546211 OR6C75A6NL08 312 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms