RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 B3GALNT2Q8NCR0 500 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 RUBCNQ92622 972 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 CEP295NLQ96MC4 621 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 CYP2S1Q96SQ9 504 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 HINFPQ9BQA5 517 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 SDCBP2Q9H190 292 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 A0A1W2PQ27 194 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 A0A1W2PQ64 194 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 A0A1W2PQD8 194 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 K7ESF4 209 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 PHACTR2O75167 634 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 RHOBTB3O94955 611 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 PAPSS2O95340 614 aaPredicted RBP22.51■■□□□ 1.19
SCARB1-210ENST00000545493 USP17L7P0C7H9 530 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 PTPN1P18031 435 aaKnown RBP22.51■■□□□ 1.19
SCARB1-210ENST00000545493 ANXA13P27216 316 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 AP3M2P53677 418 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 CDH8P55286 799 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 DMWDQ09019 674 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 NAIF1Q69YI7 327 aaPredicted RBP22.51■■□□□ 1.19
SCARB1-210ENST00000545493 ARL14EPQ8N8R7 260 aaPredicted RBP22.51■■□□□ 1.19
SCARB1-210ENST00000545493 C8orf48Q96LL4 319 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 B3GNT5Q9BYG0 378 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 ELOVL4Q9GZR5 314 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 GDPD2Q9HCC8 539 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 MYO16Q9Y6X6 1858 aa22.51■■□□□ 1.19
SCARB1-210ENST00000545493 CLDN5O00501 218 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 HOXC13P31276 330 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 CXCL12P48061 93 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 NOP14P78316 857 aaKnown RBP22.5■■□□□ 1.19
SCARB1-210ENST00000545493 KCNB1Q14721 858 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 PPP2R5DQ14738 602 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 PDGFRLQ15198 375 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 ZACNQ401N2 412 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 C1orf220Q5T0J3 134 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 FSTL4Q6MZW2 842 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 PKN3Q6P5Z2 889 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 KRBA2Q6ZNG9 492 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 KIAA2013Q8IYS2 634 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 OSCP1Q8WVF1 389 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 SCAND2PQ9GZW5 306 aaPredicted RBP22.5■■□□□ 1.19
SCARB1-210ENST00000545493 ARHGAP26Q9UNA1 814 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 TRAF3IP3Q9Y228 551 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 WNT6Q9Y6F9 365 aa22.5■■□□□ 1.19
SCARB1-210ENST00000545493 CLSTN1O94985 981 aa22.49■■□□□ 1.19
SCARB1-210ENST00000545493 TCF3P15923 654 aa22.49■■□□□ 1.19
SCARB1-210ENST00000545493 ZXDBP98169 803 aa22.49■■□□□ 1.19
SCARB1-210ENST00000545493 ZNF667Q5HYK9 610 aa22.49■■□□□ 1.19
SCARB1-210ENST00000545493 TMEM196Q5HYL7 178 aa22.49■■□□□ 1.19
SCARB1-210ENST00000545493 CC2D1AQ6P1N0 951 aaPredicted RBP22.49■■□□□ 1.19
SCARB1-210ENST00000545493 TTC16Q8NEE8 873 aa22.49■■□□□ 1.19
SCARB1-210ENST00000545493 SH3RF2Q8TEC5 729 aa22.49■■□□□ 1.19
SCARB1-210ENST00000545493 ATP6V1DQ9Y5K8 247 aa22.49■■□□□ 1.19
SCARB1-210ENST00000545493 CALUO43852 315 aaPredicted RBP22.48■■□□□ 1.19
SCARB1-210ENST00000545493 GJA4P35212 333 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 NFIL3Q16649 462 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 EML3Q32P44 896 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 CEP135Q66GS9 1140 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 FAM35AQ86V20 835 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 SYNPOQ8N3V7 929 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 TMC2Q8TDI7 906 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 ECT2Q9H8V3 914 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 DUS2Q9NX74 493 aaKnown RBP22.48■■□□□ 1.19
SCARB1-210ENST00000545493 TRPM5Q9NZQ8 1165 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 HMGXB4Q9UGU5 601 aa22.48■■□□□ 1.19
SCARB1-210ENST00000545493 ZNF840PA6NDX5 716 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 TRDMT1O14717 391 aaKnown RBP22.47■■□□□ 1.19
SCARB1-210ENST00000545493 OLFM2O95897 454 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 NR2F2P24468 414 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 ASPAP45381 313 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 NRLP54845 237 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 SPOPLQ6IQ16 392 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 PAQR9Q6ZVX9 377 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 SV2AQ7L0J3 742 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 CPA6Q8N4T0 437 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 NCDNQ9UBB6 729 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 MAPK8IP1Q9UQF2 711 aa22.47■■□□□ 1.19
SCARB1-210ENST00000545493 CHURC1-FNTBB4DL54 471 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 MAPK13O15264 365 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 AKAP3O75969 853 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 ASS1P00966 412 aaKnown RBP22.46■■□□□ 1.19
SCARB1-210ENST00000545493 OAS1P00973 400 aaKnown RBP22.46■■□□□ 1.19
SCARB1-210ENST00000545493 EGFP01133 1207 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 TRIM49P0CI25 452 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 TRIM49CP0CI26 452 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 PFKLP17858 780 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 HDCP19113 662 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 IFNAR2P48551 515 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 FNTBP49356 437 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 IFRD2Q12894 506 aaPredicted RBP22.46■■□□□ 1.19
SCARB1-210ENST00000545493 TAF10Q12962 218 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 ORC1Q13415 861 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 ZCWPW2Q504Y3 356 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 FBRSL1Q9HCM7 1045 aaKnown RBP22.46■■□□□ 1.19
SCARB1-210ENST00000545493 EHD2Q9NZN4 543 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 FRMD4BQ9Y2L6 1034 aa22.46■■□□□ 1.19
SCARB1-210ENST00000545493 ZNF202O95125 648 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 KIF20AO95235 890 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 HLA-DRAP01903 254 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 PIK3CAP42336 1068 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms