RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 LILRB5O75023 590 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 ZMYND10O75800 440 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 ABLIM3O94929 683 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 SERPINC1P01008 464 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 PTPN2P17706 415 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 CYP27A1Q02318 531 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 ZSCAN23Q3MJ62 389 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 SMYD5Q6GMV2 418 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 PHLDB3Q6NSJ2 640 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 LILRA6Q6PI73 481 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 TMC5Q6UXY8 1006 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 SCARA5Q6ZMJ2 495 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 OTOP3Q7RTS5 596 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 TCEAL8Q8IYN2 117 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 PPM1KQ8N3J5 372 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 C12orf50Q8NA57 414 aaPredicted RBP10.12□□□□□ -0.79
CIT-216ENST00000544872 EHBP1Q8NDI1 1231 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 PJA1Q8NG27 643 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 PLEKHO2Q8TD55 490 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 SMG7Q92540 1137 aaKnown RBP10.12□□□□□ -0.79
CIT-216ENST00000544872 JAKMIP2Q96AA8 810 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 FUBP3Q96I24 572 aaKnown RBP eCLIP10.12□□□□□ -0.79
CIT-216ENST00000544872 CEP295NLQ96MC4 621 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 HEXIM2Q96MH2 286 aaKnown RBP10.12□□□□□ -0.79
CIT-216ENST00000544872 SEPT5Q99719 369 aaPredicted RBP10.12□□□□□ -0.79
CIT-216ENST00000544872 LSM14BQ9BX40 385 aaKnown RBP10.12□□□□□ -0.79
CIT-216ENST00000544872 PRKD2Q9BZL6 878 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 FOXQ1Q9C009 403 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 ZCWPW1Q9H0M4 648 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 NDST4Q9H3R1 872 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 ABCB6Q9NP58 842 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 FANCLQ9NW38 375 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 ABI2Q9NYB9 513 aaPredicted RBP10.12□□□□□ -0.79
CIT-216ENST00000544872 COQ4Q9Y3A0 265 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
CIT-216ENST00000544872 GABRDO14764 452 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 TRIM66O15016 1216 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 LRRN2O75325 713 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 VNN1O95497 513 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 GLULP15104 373 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 PTPN1P18031 435 aaKnown RBP10.11□□□□□ -0.79
CIT-216ENST00000544872 CD58P19256 250 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 GRIK1P39086 918 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 NOVA1P51513 510 aaKnown RBP10.11□□□□□ -0.79
CIT-216ENST00000544872 MCCD1P59942 119 aaPredicted RBP10.11□□□□□ -0.79
CIT-216ENST00000544872 ZNF252P-AS1Q0IIN9 211 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 LRMPQ12912 555 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 DUSP4Q13115 394 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 CBWD6Q4V339 395 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 PABPC1LQ4VXU2 614 aaKnown RBP10.11□□□□□ -0.79
CIT-216ENST00000544872 INTS6LQ5JSJ4 861 aaKnown RBP10.11□□□□□ -0.79
CIT-216ENST00000544872 CBWD3Q5JTY5 395 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 CBWD5Q5RIA9 395 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 TSSK4Q6SA08 328 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 VSTM1Q6UX27 236 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 RNF19BQ6ZMZ0 732 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 GPR149Q86SP6 731 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 FMNL3Q8IVF7 1028 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 AOPEPQ8N6M6 819 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 B3GALNT2Q8NCR0 500 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 MYCBPAPQ8TBZ2 947 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 PGLYRP2Q96PD5 576 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 PI4K2AQ9BTU6 479 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 RHOBTB2Q9BYZ6 727 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 ELOVL4Q9GZR5 314 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 XYLT2Q9H1B5 865 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.11□□□□□ -0.79
CIT-216ENST00000544872 ARHGEF3Q9NR81 526 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 RXFP3Q9NSD7 469 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.11□□□□□ -0.79
CIT-216ENST00000544872 GCNT4Q9P109 453 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 FBXW11Q9UKB1 542 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 GTF3C4Q9UKN8 822 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 WDR81Q562E7 1941 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 RALGAPA1Q6GYQ0 2036 aa10.11□□□□□ -0.79
CIT-216ENST00000544872 WDR27A2RRH5 827 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 TOP3BO95985 862 aaKnown RBP10.1□□□□□ -0.79
CIT-216ENST00000544872 POU2F2P09086 479 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 CCDC172P0C7W6 258 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 ACAT1P24752 427 aaKnown RBP10.1□□□□□ -0.79
CIT-216ENST00000544872 NDST1P52848 882 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 BPIFB4P59827 614 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 TWF1Q12792 350 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 CUL2Q13617 745 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 ARHGAP15Q53QZ3 475 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 HSP90AA4PQ58FG1 418 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 C1orf220Q5T0J3 134 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 PDZD4Q76G19 769 aaPredicted RBP10.1□□□□□ -0.79
CIT-216ENST00000544872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.1□□□□□ -0.79
CIT-216ENST00000544872 SCN4BQ8IWT1 228 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 CXorf38Q8TB03 319 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 GPR88Q9GZN0 384 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 INTS2Q9H0H0 1204 aaKnown RBP10.1□□□□□ -0.79
CIT-216ENST00000544872 GZF1Q9H116 711 aaPredicted RBP10.1□□□□□ -0.79
CIT-216ENST00000544872 TSPY26PQ9H489 355 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 UBE2TQ9NPD8 197 aaPredicted RBP10.1□□□□□ -0.79
CIT-216ENST00000544872 ASAH2Q9NR71 780 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 CISHQ9NSE2 258 aa10.1□□□□□ -0.79
CIT-216ENST00000544872 SAMSN1Q9NSI8 373 aaKnown RBP10.1□□□□□ -0.79
CIT-216ENST00000544872 IGSF9Q9P2J2 1179 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms