RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TRPV4Q9HBA0 871 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 TAB2Q9NYJ8 693 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 UXTQ9UBK9 157 aaPredicted RBP20.28■□□□□ 0.84
DDX55-211ENST00000544429 MUTYHQ9UIF7 546 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 FAM92AA1XBS5 289 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 HHLA1C9JL84 531 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 PI4K2BG5E9Z4 385 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 AP1G2O75843 785 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 ASGR2P07307 311 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 FCARP24071 287 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 WEE1P30291 646 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 GJB7Q6PEY0 223 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 FGF14Q92915 247 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 HEXIM2Q96MH2 286 aaKnown RBP20.27■□□□□ 0.84
DDX55-211ENST00000544429 ASB16Q96NS5 453 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 MED10Q9BTT4 135 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 GPR88Q9GZN0 384 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 PNPLA8Q9NP80 782 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 UBE2TQ9NPD8 197 aaPredicted RBP20.27■□□□□ 0.84
DDX55-211ENST00000544429 KIAA1257Q9ULG3 409 aa20.27■□□□□ 0.84
DDX55-211ENST00000544429 SOBPA7XYQ1 873 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 FAM200BP0CF97 657 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 ATP1A3P13637 1013 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 ANXA13P27216 316 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 COPB1P53618 953 aaKnown RBP20.26■□□□□ 0.83
DDX55-211ENST00000544429 STXBP5Q5T5C0 1151 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 TMEM270Q6UE05 265 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 PARM1Q6UWI2 310 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 NUP93Q8N1F7 819 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 MCRS1Q96EZ8 462 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 ZSWIM1Q9BR11 485 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 DUSP16Q9BY84 665 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 AJAP1Q9UKB5 411 aaPredicted RBP20.26■□□□□ 0.83
DDX55-211ENST00000544429 SORCS3Q9UPU3 1222 aa20.26■□□□□ 0.83
DDX55-211ENST00000544429 KIF26AQ9ULI4 1882 aaPredicted RBP20.26■□□□□ 0.83
DDX55-211ENST00000544429 TECTAO75443 2155 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 BECN2A8MW95 431 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 O00370 1275 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 DCXO43602 365 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 CAVIN2O95810 425 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 VDRP11473 427 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 NPR3P17342 541 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 ADORA2BP29275 332 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 TAF12Q16514 161 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 PKDCCQ504Y2 493 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 FAM78AQ5JUQ0 283 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 MTSS1LQ765P7 747 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 ANKRD52Q8NB46 1076 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 RBBP8NLQ8NC74 664 aaPredicted RBP20.25■□□□□ 0.83
DDX55-211ENST00000544429 RSAD2Q8WXG1 361 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 TFAP2BQ92481 460 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 SHC3Q92529 594 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 RPP25Q9BUL9 199 aaKnown RBP20.25■□□□□ 0.83
DDX55-211ENST00000544429 NAA15Q9BXJ9 866 aaKnown RBP20.25■□□□□ 0.83
DDX55-211ENST00000544429 VPS16Q9H269 839 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 ATXN3LQ9H3M9 355 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 TASP1Q9H6P5 420 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 COMMD8Q9NX08 183 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 EHD2Q9NZN4 543 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 ZMYM5Q9UJ78 669 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 MAGED2Q9UNF1 606 aaPredicted RBP20.25■□□□□ 0.83
DDX55-211ENST00000544429 PCDHB4Q9Y5E5 795 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 NUMBLQ9Y6R0 609 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 NCANO14594 1321 aa20.25■□□□□ 0.83
DDX55-211ENST00000544429 SMTNL1A8MU46 457 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 LGALS16A8MUM7 142 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 ECI2O75521 394 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 RTN3O95197 1032 aaPredicted RBP20.24■□□□□ 0.83
DDX55-211ENST00000544429 DDX6P26196 483 aaKnown RBP eCLIP20.24■□□□□ 0.83
DDX55-211ENST00000544429 SLC5A3P53794 718 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 MFAP3P55082 362 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 MAP3K7CLP57077 242 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 CYP4F8P98187 520 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 SGO2Q562F6 1265 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 KLHDC7AQ5VTJ3 777 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 TTC30AQ86WT1 665 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 SLC44A3Q8N4M1 653 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 SMARCD2Q92925 531 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 SLC46A2Q9BY10 475 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 UBXN6Q9BZV1 441 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 CBX8Q9HC52 389 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 PLCB1Q9NQ66 1216 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 SIK3Q9Y2K2 1263 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 MYO16Q9Y6X6 1858 aa20.24■□□□□ 0.83
DDX55-211ENST00000544429 HELZP42694 1942 aaKnown RBP20.23■□□□□ 0.83
DDX55-211ENST00000544429 TDGQ13569 410 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 GPR158Q5T848 1215 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 SNX30Q5VWJ9 437 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 LCLAT1Q6UWP7 414 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 GPRIN1Q7Z2K8 1008 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 SCAMP5Q8TAC9 235 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 ZSCAN18Q8TBC5 510 aaPredicted RBP20.23■□□□□ 0.83
DDX55-211ENST00000544429 OVCA2Q8WZ82 227 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 ELSPBP1Q96BH3 223 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 GCNAQ96QF7 691 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 TSPAN16Q9UKR8 245 aa20.23■□□□□ 0.83
DDX55-211ENST00000544429 ZDHHC11BP0C7U3 371 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 ALADP13716 330 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 RFX1P22670 979 aa20.22■□□□□ 0.83
DDX55-211ENST00000544429 YWHAQP27348 245 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms