RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 GRPEL1Q9HAV7 217 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CSNK1G1Q9HCP0 422 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 TMEM30AQ9NV96 361 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MAGED2Q9UNF1 606 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ASB3Q9Y575 518 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ADCY5O95622 1261 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CSH1P0DML2 217 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CSH2P0DML3 217 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PTPN2P17706 415 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ZBED6P86452 979 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PDE4CQ08493 712 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MTMR3Q13615 1198 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ASIC2Q16515 512 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CYP26C1Q6V0L0 522 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 DENND5BQ6ZUT9 1274 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 GRASPQ7Z6J2 395 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 NUP93Q8N1F7 819 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SMRP1Q8NCR6 262 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ZMIZ2Q8NF64 920 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SECISBP2LQ93073 1101 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PSMG2Q969U7 264 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SPATA17Q96L03 361 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 RIPOR3Q96MK2 946 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PRDM6Q9NQX0 595 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ASAH2Q9NR71 780 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 HCFC1R1Q9NWW0 138 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 GREB1Q4ZG55 1949 aa15.31■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PATJQ8NI35 1801 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 POU2F2P09086 479 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SETSIPP0DME0 302 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 NOP9Q86U38 636 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PASD1Q8IV76 773 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 EPS8L1Q8TE68 723 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CEP295NLQ96MC4 621 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 EHD2Q9NZN4 543 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 DNMT3BQ9UBC3 853 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CDH22Q9UJ99 828 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CEP83Q9Y592 693 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 EYSQ5T1H1 3165 aa15.3■□□□□ 0.04
TNFRSF1A-216ENST00000543995 DOCK6Q96HP0 2047 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 XPO1O14980 1071 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 RTN3O95197 1032 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MMEP08473 750 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CFHP08603 1231 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MYL4P12829 197 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MTHFRP42898 656 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SLC5A3P53794 718 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 TFF2Q03403 129 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SMAD4Q13485 552 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PABPC1LQ4VXU2 614 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PKDCCQ504Y2 493 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CYP4A22Q5TCH4 519 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 DENND1BQ6P3S1 775 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PDZD4Q76G19 769 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PIGZQ86VD9 579 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ZNF677Q86XU0 584 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 HS6ST3Q8IZP7 471 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SLC20A1Q8WUM9 679 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 LRRC4Q9HBW1 653 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PNPLA8Q9NP80 782 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SEPT11Q9NVA2 429 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 AIPL1Q9NZN9 384 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 THEGQ9P2T0 379 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PCDHGC3Q9UN70 934 aa15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 USP15Q9Y4E8 981 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ZNF638Q14966 1978 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-216ENST00000543995 TULP2O00295 520 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PAPLNO95428 1278 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 RHOP08100 348 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PLA2G4AP47712 749 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 NTHL1P78549 312 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CDR2Q01850 454 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 KLHL30Q0D2K2 578 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CBX2Q14781 532 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MEA1Q16626 185 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 TSR1Q2NL82 804 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 LEXMQ3ZCV2 418 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SLC35F5Q8WV83 523 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 DDX1Q92499 740 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SYN2Q92777 582 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 UBXN6Q9BZV1 441 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ZNF334Q9HCZ1 680 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 UXTQ9UBK9 157 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 NOCTQ9UK39 431 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MYO16Q9Y6X6 1858 aa15.28■□□□□ 0.04
TNFRSF1A-216ENST00000543995 HHLA1C9JL84 531 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 AKR1B15C9JRZ8 316 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MBTPS2O43462 519 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 HMGA1P17096 107 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 YWHAQP27348 245 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CDC25BP30305 580 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 GPD2P43304 727 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 RGS7P49802 495 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ADKP55263 362 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 USP46P62068 366 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 GPRIN1Q7Z2K8 1008 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 IRF2BP2Q7Z5L9 587 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CNGA4Q8IV77 575 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms