RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 DNAJB7Q7Z6W7 309 aaPredicted RBP14.42□□□□□ -0.1
SP140-213ENST00000543928 VSTM4Q8IW00 320 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 HS6ST3Q8IZP7 471 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 UBA3Q8TBC4 463 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 ZNF606Q8WXB4 792 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 SUSD6Q92537 303 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 BAP1Q92560 729 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 SPATA17Q96L03 361 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 CORO1BQ9BR76 489 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 EDEM3Q9BZQ6 932 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 CSNK1G1Q9HCP0 422 aa14.42□□□□□ -0.1
SP140-213ENST00000543928 M0QYV0 167 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 MED7O43513 233 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 CSH1P0DML2 217 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 CSH2P0DML3 217 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 CYP11B1P15538 503 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 PDE6CP51160 858 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 ZNF75DP51815 510 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 SLC8A3P57103 927 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 PDE4CQ08493 712 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 CBX2Q14781 532 aaPredicted RBP14.41□□□□□ -0.1
SP140-213ENST00000543928 PABPC1LQ4VXU2 614 aaKnown RBP14.41□□□□□ -0.1
SP140-213ENST00000543928 PKDCCQ504Y2 493 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 SPECC1LQ69YQ0 1117 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 PTCRAQ6ISU1 281 aaPredicted RBP14.41□□□□□ -0.1
SP140-213ENST00000543928 DENND5BQ6ZUT9 1274 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 CPLX3Q8WVH0 158 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 IQCDQ96DY2 449 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 CEP295NLQ96MC4 621 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 NECTIN4Q96NY8 510 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 ZNF334Q9HCZ1 680 aaPredicted RBP14.41□□□□□ -0.1
SP140-213ENST00000543928 WDR6Q9NNW5 1121 aaKnown RBP14.41□□□□□ -0.1
SP140-213ENST00000543928 ASAH2Q9NR71 780 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 MYO6Q9UM54 1294 aa14.41□□□□□ -0.1
SP140-213ENST00000543928 MAGED2Q9UNF1 606 aaPredicted RBP14.41□□□□□ -0.1
SP140-213ENST00000543928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.41□□□□□ -0.1
SP140-213ENST00000543928 XIRP2A4UGR9 3374 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 A0A1W2PQJ5 194 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 LRRC53A6NM62 1247 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 HHLA1C9JL84 531 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 GYPCP04921 128 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 RHOP08100 348 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 CFHP08603 1231 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 MYL4P12829 197 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 HMGA1P17096 107 aaKnown RBP14.4□□□□□ -0.1
SP140-213ENST00000543928 KCNQ1P51787 676 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 USP46P62068 366 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 ARID5AQ03989 594 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 BST2Q10589 180 aaKnown RBP14.4□□□□□ -0.1
SP140-213ENST00000543928 IFRD2Q12894 506 aaPredicted RBP14.4□□□□□ -0.1
SP140-213ENST00000543928 AAK1Q2M2I8 961 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 PUS10Q3MIT2 529 aaKnown RBP14.4□□□□□ -0.1
SP140-213ENST00000543928 CYP4A22Q5TCH4 519 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 DENND1BQ6P3S1 775 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 PDZD4Q76G19 769 aaPredicted RBP14.4□□□□□ -0.1
SP140-213ENST00000543928 NOP9Q86U38 636 aaKnown RBP14.4□□□□□ -0.1
SP140-213ENST00000543928 PIGZQ86VD9 579 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 TMC8Q8IU68 726 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 NUP93Q8N1F7 819 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 EPS8L1Q8TE68 723 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 SECISBP2LQ93073 1101 aaKnown RBP14.4□□□□□ -0.1
SP140-213ENST00000543928 LRRC3Q9BY71 257 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 POMKQ9H5K3 350 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 CLUHO75153 1309 aa14.4□□□□□ -0.1
SP140-213ENST00000543928 NOTCH4Q99466 2003 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 TULP2O00295 520 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 TNFRSF10BO14763 440 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 XPO1O14980 1071 aaKnown RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 RTN3O95197 1032 aaPredicted RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 SETSIPP0DME0 302 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 FERP16591 822 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 FSHRP23945 695 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 KRT9P35527 623 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 SLC5A3P53794 718 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 EPHA5P54756 1037 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 SMAD2Q15796 467 aaKnown RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 MEA1Q16626 185 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 SLC5A9Q2M3M2 681 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 SFMBT2Q5VUG0 894 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 TAF3Q5VWG9 929 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 GPRIN1Q7Z2K8 1008 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 LEMD2Q8NC56 503 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 SCAMP5Q8TAC9 235 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 ATXN2LQ8WWM7 1075 aaKnown RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 TRMT2BQ96GJ1 504 aaKnown RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 MRFAP1L1Q96HT8 127 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 MYRFLQ96LU7 910 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 UBXN6Q9BZV1 441 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 PNPLA8Q9NP80 782 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 AVENQ9NQS1 362 aaPredicted RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 NOCTQ9UK39 431 aaKnown RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 CAPN11Q9UMQ6 739 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 PCDHGC3Q9UN70 934 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 FAM50BQ9Y247 325 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 LUC7L2Q9Y383 392 aaKnown RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 MRPS23Q9Y3D9 190 aaKnown RBP14.39□□□□□ -0.11
SP140-213ENST00000543928 GREB1Q4ZG55 1949 aa14.39□□□□□ -0.11
SP140-213ENST00000543928 CCDC172P0C7W6 258 aa14.38□□□□□ -0.11
SP140-213ENST00000543928 IL9P15248 144 aa14.38□□□□□ -0.11
SP140-213ENST00000543928 GABRR2P28476 465 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms