RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PGM2Q96G03 612 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 DPEP3Q9H4B8 488 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 GDAP2Q9NXN4 497 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 PCNTO95613 3336 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 SGK1O00141 431 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 CST8O60676 142 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 GRAP2O75791 330 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 DESP17661 470 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 GNL1P36915 607 aaPredicted RBP17.9■□□□□ 0.46
PTPRO-209ENST00000543886 MDH1P40925 334 aaKnown RBP17.9■□□□□ 0.46
PTPRO-209ENST00000543886 ARSEP51690 589 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 GJA9P57773 515 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 PPP2R2AP63151 447 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 OASLQ15646 514 aaKnown RBP17.9■□□□□ 0.46
PTPRO-209ENST00000543886 TAZQ16635 292 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 C6orf118Q5T5N4 469 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 UBAP2Q5T6F2 1119 aaKnown RBP17.9■□□□□ 0.46
PTPRO-209ENST00000543886 CEP128Q6ZU80 1094 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 BBS12Q6ZW61 710 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 PRUNE1Q86TP1 453 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 RSPH3Q86UC2 560 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 FAM228AQ86W67 206 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 SMG8Q8ND04 991 aaKnown RBP17.9■□□□□ 0.46
PTPRO-209ENST00000543886 APPL2Q8NEU8 664 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 DDX23Q9BUQ8 820 aaKnown RBP17.9■□□□□ 0.46
PTPRO-209ENST00000543886 TMEM109Q9BVC6 243 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 SLC4A5Q9BY07 1137 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 SPC25Q9HBM1 224 aa17.9■□□□□ 0.46
PTPRO-209ENST00000543886 RGS16O15492 202 aaPredicted RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 PRPSAP2O60256 369 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 ACSL3O95573 720 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 PDGFRBP09619 1106 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 CYBAP13498 195 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 CDR1P51861 262 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 OLFML1Q6UWY5 402 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 RFX6Q8HWS3 928 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 CMASQ8NFW8 434 aaPredicted RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 SLC35F5Q8WV83 523 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 KBTBD7Q8WVZ9 684 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 TLCD1Q96CP7 247 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 PIWIL1Q96J94 861 aaKnown RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 CALN1Q9BXU9 219 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 STMN4Q9H169 189 aaPredicted RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 GOLGA2P5Q9HBQ8 144 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 DNAJC17Q9NVM6 304 aaKnown RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 TLL2Q9Y6L7 1015 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 NDC80O14777 642 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 SPTLC1O15269 473 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 CA12O43570 354 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 OTUD4Q01804 1114 aaKnown RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 SLC6A3Q01959 620 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 SOX4Q06945 474 aaPredicted RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 PDE4CQ08493 712 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 CDO1Q16878 200 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 TRNP1Q6NT89 227 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 HIBCHQ6NVY1 386 aaPredicted RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 CXCL17Q6UXB2 119 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 TMEM110Q86TL2 294 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 ZDHHC17Q8IUH5 632 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 SLC35B2Q8TB61 432 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 ACTL9Q8TC94 416 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 EPS8L3Q8TE67 593 aaKnown RBP17.89■□□□□ 0.45
PTPRO-209ENST00000543886 STK32AQ8WU08 396 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 TMEM121Q9BTD3 319 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 FOXP3Q9BZS1 431 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 RSAD1Q9HA92 442 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 GTF2IRD1Q9UHL9 959 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 TRPV2Q9Y5S1 764 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 CDY2AQ9Y6F7 541 aa17.89■□□□□ 0.45
PTPRO-209ENST00000543886 DCDC2CA8MYV0 355 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 DPYSL4O14531 572 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 DNALI1O14645 258 aaPredicted RBP17.88■□□□□ 0.45
PTPRO-209ENST00000543886 RASGRF2O14827 1237 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 HUS1O60921 280 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 CD48P09326 243 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 ADORA2BP29275 332 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 LSP1P33241 339 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 PSMC4P43686 418 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 BCAT1P54687 386 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 BST2Q10589 180 aaKnown RBP17.88■□□□□ 0.45
PTPRO-209ENST00000543886 GPS1Q13098 491 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 TAF5Q15542 800 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 C15orf59Q2T9L4 293 aaPredicted RBP17.88■□□□□ 0.45
PTPRO-209ENST00000543886 NBPF20Q3BBV1 942 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 SH3PXD2AQ5TCZ1 1133 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 ARRDC4Q8NCT1 418 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 BCAS4Q8TDM0 211 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 PEBP4Q96S96 227 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 PCDH9Q9HC56 1237 aa17.88■□□□□ 0.45
PTPRO-209ENST00000543886 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTPRO-209ENST00000543886 ABT1Q9ULW3 272 aaKnown RBP17.88■□□□□ 0.45
PTPRO-209ENST00000543886 HCRTO43612 131 aa17.87■□□□□ 0.45
PTPRO-209ENST00000543886 TTC4O95801 387 aa17.87■□□□□ 0.45
PTPRO-209ENST00000543886 PGK1P00558 417 aa17.87■□□□□ 0.45
PTPRO-209ENST00000543886 ZSCAN5DPP0CG00 497 aa17.87■□□□□ 0.45
PTPRO-209ENST00000543886 FGFR1P11362 822 aa17.87■□□□□ 0.45
PTPRO-209ENST00000543886 CCDC130P13994 396 aa17.87■□□□□ 0.45
PTPRO-209ENST00000543886 SDC4P31431 198 aa17.87■□□□□ 0.45
PTPRO-209ENST00000543886 FAM47CQ5HY64 1035 aa17.87■□□□□ 0.45
PTPRO-209ENST00000543886 SCUBE3Q8IX30 993 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms