RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ING5Q8WYH8 240 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 SHC3Q92529 594 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 FBXO32Q969P5 355 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 PSMG2Q969U7 264 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 ZNF707Q96C28 371 aaPredicted RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 ACSF2Q96CM8 615 aaPredicted RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 RPGRIP1Q96KN7 1286 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 C8orf48Q96LL4 319 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 SLITRK1Q96PX8 696 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 KCNK16Q96T55 309 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 DUSP16Q9BY84 665 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 S1PR5Q9H228 398 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 ATXN3LQ9H3M9 355 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 POMKQ9H5K3 350 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 LRRC4Q9HBW1 653 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 ST7Q9NRC1 585 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 DNMT3BQ9UBC3 853 aaKnown RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 UXTQ9UBK9 157 aaPredicted RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 CDH22Q9UJ99 828 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 NR2E1Q9Y466 385 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 CLUHO75153 1309 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 MYO16Q9Y6X6 1858 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 MYO7AQ13402 2215 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 A0A1W2PRU2 124 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 LRRC53A6NM62 1247 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 O00370 1275 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 EPHB6O15197 1021 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 BEST1O76090 585 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 NOL4O94818 638 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 POU2F2P09086 479 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SETSIPP0DME0 302 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 LCP1P13796 627 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 CYP11B1P15538 503 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 FERP16591 822 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 GJA1P17302 382 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 YWHAQP27348 245 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 CDC25CP30307 473 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 CLCN1P35523 988 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SOX5P35711 763 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 RGS7P49802 495 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 ZNF132P52740 706 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SLC5A3P53794 718 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 CACNA2D1P54289 1103 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 PDE4CQ08493 712 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 MTMR3Q13615 1198 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 TRIM14Q14142 442 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 CNGA2Q16280 664 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SFMBT2Q5VUG0 894 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SPECC1LQ69YQ0 1117 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 LCLAT1Q6UWP7 414 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 CLEC20AQ6ZU45 233 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 PAQR9Q6ZVX9 377 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 OTOP3Q7RTS5 596 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 TMC6Q7Z403 805 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SLC47A2Q86VL8 602 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 PASD1Q8IV76 773 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
LTBR-212ENST00000543542 FAM71AQ8IYT1 594 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SIX6OS1Q8N1H7 587 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 TDRD5Q8NAT2 981 aaKnown RBP6.67□□□□□ -1.34
LTBR-212ENST00000543542 TTC16Q8NEE8 873 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 TFAP2BQ92481 460 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 MRPS31Q92665 395 aaKnown RBP6.67□□□□□ -1.34
LTBR-212ENST00000543542 SECISBP2LQ93073 1101 aaKnown RBP6.67□□□□□ -1.34
LTBR-212ENST00000543542 IQCDQ96DY2 449 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 MCRS1Q96EZ8 462 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SPATA17Q96L03 361 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 CEP295NLQ96MC4 621 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 NOX5Q96PH1 765 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 ASB2Q96Q27 587 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SMOQ99835 787 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 PHF7Q9BWX1 381 aaPredicted RBP6.67□□□□□ -1.34
LTBR-212ENST00000543542 NAA15Q9BXJ9 866 aaKnown RBP6.67□□□□□ -1.34
LTBR-212ENST00000543542 NACA2Q9H009 215 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 FBXO44Q9H4M3 255 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 SYNCQ9H7C4 482 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 TRPC7Q9HCX4 862 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 WDR6Q9NNW5 1121 aaKnown RBP6.67□□□□□ -1.34
LTBR-212ENST00000543542 ACP6Q9NPH0 428 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 TRPM5Q9NZQ8 1165 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.67□□□□□ -1.34
LTBR-212ENST00000543542 CNTN6Q9UQ52 1028 aa6.67□□□□□ -1.34
LTBR-212ENST00000543542 LUC7L2Q9Y383 392 aaKnown RBP6.67□□□□□ -1.34
LTBR-212ENST00000543542 FAM170AA1A519 330 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 GOLGA6L3A6NEY3 463 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 GOLGA6L6A8MZA4 724 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 PIK3R2O00459 728 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 DPYSL4O14531 572 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 XPO1O14980 1071 aaKnown RBP6.66□□□□□ -1.34
LTBR-212ENST00000543542 CEBPBP17676 345 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 TNFAIP3P21580 790 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 CASP14P31944 242 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 TKTL1P51854 596 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 JAM2P57087 298 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 SNX16P57768 344 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 CYP4F8P98187 520 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 KLHL30Q0D2K2 578 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 TAF10Q12962 218 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 TEAD2Q15562 447 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 SMAD2Q15796 467 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms