RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 CHI3L1P36222 383 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-215ENST00000543185 GUCA1AP43080 201 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-215ENST00000543185 IRGCQ6NXR0 463 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 IL1RL2Q9HB29 575 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 POLG2Q9UHN1 485 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 NLRP1Q9C000 1473 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 HEATR9A2RTY3 570 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 CES2O00748 559 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 ANKRD49Q8WVL7 239 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 HAO1Q9UJM8 370 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 BMP10O95393 424 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 MAPKAPK2P49137 400 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 RBP5P82980 135 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 SHC4Q6S5L8 630 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 MB21D2Q8IYB1 491 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-215ENST00000543185 BTBD3Q9Y2F9 522 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 USP17L8P0C7I0 530 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 TUBA4AP68366 448 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 C6orf203Q9P0P8 240 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-215ENST00000543185 H3BMM5 538 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 ATP1A4Q13733 1029 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 MTF1Q14872 753 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 TSC22D1Q15714 1073 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 WDR36Q8NI36 951 aaKnown RBP20.03■□□□□ 0.8
HDAC4-215ENST00000543185 SORCS3Q9UPU3 1222 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 TBX3O15119 743 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 MFN2O95140 757 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 PRR29P0C7W0 189 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 ARHGEF7Q14155 803 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 ITGAXP20702 1163 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 COILP38432 576 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-215ENST00000543185 PTRHD1Q6GMV3 140 aaKnown RBP20.02■□□□□ 0.8
HDAC4-215ENST00000543185 CHMP1BQ7LBR1 199 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 DMAP1Q9NPF5 467 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-215ENST00000543185 FHOD1Q9Y613 1164 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 CYBBP04839 570 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 TMEM132DQ14C87 1099 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 L3MBTL3Q96JM7 780 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-215ENST00000543185 USP6P35125 1406 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 UNC13BO14795 1591 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 SFI1A8K8P3 1242 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 GDF11O95390 407 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 HAUS6Q7Z4H7 955 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 ADSSL1Q8N142 457 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 REXO4Q9GZR2 422 aaKnown RBP20.02■□□□□ 0.8
HDAC4-215ENST00000543185 GGA2Q9UJY4 613 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 ZBTB1Q9Y2K1 713 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 AAR2Q9Y312 384 aaKnown RBP20.02■□□□□ 0.8
HDAC4-215ENST00000543185 CYP26A1O43174 497 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 PHGDHO43175 533 aaKnown RBP20.02■□□□□ 0.8
HDAC4-215ENST00000543185 FSBPO95073 299 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 PTGER2P43116 358 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 DENND1BQ6P3S1 775 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 FUT8Q9BYC5 575 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 ANKRD6Q9Y2G4 727 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 C2orf81A6NN90 581 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 F8W810 466 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 SOAT1P35610 550 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 TRAF3Q13114 568 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 MRNIPQ6NTE8 343 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 DENND6AQ8IWF6 608 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 MDM1Q8TC05 714 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 TSEN34Q9BSV6 310 aaKnown RBP20.02■□□□□ 0.8
HDAC4-215ENST00000543185 SLC7A5P2Q9GIP4 190 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 COA1Q9GZY4 146 aa20.02■□□□□ 0.8
HDAC4-215ENST00000543185 SYNDIG1LA6NDD5 238 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 USP17L5A8MUK1 530 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 PDK2Q15119 407 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 FNIP1Q8TF40 1166 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 UGT2B28Q9BY64 529 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 TMBIM4Q9HC24 238 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 CCDC182A6NF36 153 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 AHCYL1O43865 530 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 CCT3P49368 545 aaKnown RBP20.02■□□□□ 0.79
HDAC4-215ENST00000543185 SLC9A5Q14940 896 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 DCAF4L1Q3SXM0 396 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 AIFM3Q96NN9 605 aa20.02■□□□□ 0.79
HDAC4-215ENST00000543185 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-215ENST00000543185 C1orf232A0A0U1RR37 186 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 TRIM49D1C9J1S8 452 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ATP9AO75110 1047 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 CD4P01730 458 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 NPR3P17342 541 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 TC2NQ8N9U0 490 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 RNPEPQ9H4A4 650 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ZC3H4Q9UPT8 1303 aaKnown RBP20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ACCSLQ4AC99 568 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 CHD4Q14839 1912 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 KCNA6P17658 529 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 HNMTP50135 292 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 FCHO2Q0JRZ9 810 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 NCOA4Q13772 614 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 STARD8Q92502 1023 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 DNAJC7Q99615 494 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 DDX20Q9UHI6 824 aaKnown RBP20.01■□□□□ 0.79
HDAC4-215ENST00000543185 TMEM114B3SHH9 223 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ZBTB39O15060 712 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 IFNGR2P38484 337 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms