RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 ITIH5Q86UX2 942 aa18.11■□□□□ 0.49
LIG1-204ENST00000542460 ELMOD1Q8N336 334 aa18.11■□□□□ 0.49
LIG1-204ENST00000542460 C12orf76Q8N812 135 aaPredicted RBP18.11■□□□□ 0.49
LIG1-204ENST00000542460 ZMIZ2Q8NF64 920 aa18.11■□□□□ 0.49
LIG1-204ENST00000542460 UBA3Q8TBC4 463 aa18.11■□□□□ 0.49
LIG1-204ENST00000542460 DNAJC7Q99615 494 aa18.11■□□□□ 0.49
LIG1-204ENST00000542460 PDCL3Q9H2J4 239 aa18.11■□□□□ 0.49
LIG1-204ENST00000542460 PLXNA3P51805 1871 aa18.11■□□□□ 0.49
LIG1-204ENST00000542460 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.1■□□□□ 0.49
LIG1-204ENST00000542460 CCL16O15467 120 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 HNRNPH3P31942 346 aaKnown RBP18.1■□□□□ 0.49
LIG1-204ENST00000542460 SSTR3P32745 418 aaPredicted RBP18.1■□□□□ 0.49
LIG1-204ENST00000542460 ADKP55263 362 aaKnown RBP18.1■□□□□ 0.49
LIG1-204ENST00000542460 PDE4CQ08493 712 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 KLHL30Q0D2K2 578 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 SDHAF4Q5VUM1 108 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 TAF3Q5VWG9 929 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 E4F1Q66K89 784 aaPredicted RBP18.1■□□□□ 0.49
LIG1-204ENST00000542460 SYCE2Q6PIF2 218 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 CYP26C1Q6V0L0 522 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 GIPC2Q8TF65 315 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 ZNF512Q96ME7 567 aaPredicted RBP18.1■□□□□ 0.49
LIG1-204ENST00000542460 LHX5Q9H2C1 402 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 PNPLA8Q9NP80 782 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 IMPACTQ9P2X3 320 aa18.1■□□□□ 0.49
LIG1-204ENST00000542460 BZW2Q9Y6E2 419 aaKnown RBP18.1■□□□□ 0.49
LIG1-204ENST00000542460 XPO1O14980 1071 aaKnown RBP18.09■□□□□ 0.49
LIG1-204ENST00000542460 CFHP08603 1231 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 CSH1P0DML2 217 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 CSH2P0DML3 217 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 GPD2P43304 727 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 ITIH3Q06033 890 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 TAF12Q16514 161 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 RARS2Q5T160 578 aaKnown RBP18.09■□□□□ 0.49
LIG1-204ENST00000542460 DENND1BQ6P3S1 775 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 TMC5Q6UXY8 1006 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 DENND5BQ6ZUT9 1274 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 GPR152Q8TDT2 470 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 SLC20A1Q8WUM9 679 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 SLC35F5Q8WV83 523 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 SECISBP2LQ93073 1101 aaKnown RBP18.09■□□□□ 0.49
LIG1-204ENST00000542460 HLA-CQ95604 372 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 PSMG2Q969U7 264 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 ZNF707Q96C28 371 aaPredicted RBP18.09■□□□□ 0.49
LIG1-204ENST00000542460 MSLNLQ96KJ4 702 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 HAUS4Q9H6D7 363 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 UBE2ZQ9H832 354 aaPredicted RBP18.09■□□□□ 0.49
LIG1-204ENST00000542460 ABHD10Q9NUJ1 306 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 ZNHIT6Q9NWK9 470 aaKnown RBP18.09■□□□□ 0.49
LIG1-204ENST00000542460 CEP83Q9Y592 693 aa18.09■□□□□ 0.49
LIG1-204ENST00000542460 SERPING1P05155 500 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 MMEP08473 750 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 CHRNB2P17787 502 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 PLA2G4AP47712 749 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 DNAJB7Q7Z6W7 309 aaPredicted RBP18.08■□□□□ 0.49
LIG1-204ENST00000542460 GPR149Q86SP6 731 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 PIGZQ86VD9 579 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 NUP93Q8N1F7 819 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 SMG7Q92540 1137 aaKnown RBP18.08■□□□□ 0.49
LIG1-204ENST00000542460 ANP32BQ92688 251 aaKnown RBP18.08■□□□□ 0.49
LIG1-204ENST00000542460 AGPAT1Q99943 283 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 S1PR5Q9H228 398 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 ADAM7Q9H2U9 754 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 PIDD1Q9HB75 910 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 EHD2Q9NZN4 543 aa18.08■□□□□ 0.49
LIG1-204ENST00000542460 SLC38A8A6NNN8 435 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 GOLGA6L6A8MZA4 724 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 HHLA1C9JL84 531 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 TNFRSF10BO14763 440 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 SKILP12757 684 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 PTPN2P17706 415 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 FMO1Q01740 532 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 GOLGA8FQ08AF8 430 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 GOLGA8DPQ0D2H9 430 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 HGSNATQ68CP4 663 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 CES5AQ6NT32 575 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 PASD1Q8IV76 773 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 TC2NQ8N9U0 490 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 SPC24Q8NBT2 197 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 TMEM35BQ8NCS4 154 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 STK32AQ8WU08 396 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 APOL5Q9BWW9 433 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 COMMD8Q9NX08 183 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 COG5Q9UP83 839 aa18.08■□□□□ 0.48
LIG1-204ENST00000542460 SPTBN5Q9NRC6 3674 aaKnown RBP18.07■□□□□ 0.48
LIG1-204ENST00000542460 TULP2O00295 520 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 RTN3O95197 1032 aaPredicted RBP18.07■□□□□ 0.48
LIG1-204ENST00000542460 LSM8O95777 96 aaKnown RBP18.07■□□□□ 0.48
LIG1-204ENST00000542460 TNFAIP3P21580 790 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 KCNA5P22460 613 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 CDH5P33151 784 aaPredicted RBP18.07■□□□□ 0.48
LIG1-204ENST00000542460 SLC5A3P53794 718 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 MTMR3Q13615 1198 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 TDRD12Q587J7 1177 aaKnown RBP18.07■□□□□ 0.48
LIG1-204ENST00000542460 PMF1Q6P1K2 205 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 WDR59Q6PJI9 974 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 TRIM72Q6ZMU5 477 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 WDTC1Q8N5D0 677 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 KCTD13Q8WZ19 329 aa18.07■□□□□ 0.48
LIG1-204ENST00000542460 HSFY1Q96LI6 401 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms