RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 LAIR1Q6GTX8 287 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 DCLK2Q8N568 766 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 ARL14EPQ8N8R7 260 aaPredicted RBP12.14□□□□□ -0.47
VTN-203ENST00000542029 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 B3GALNT2Q8NCR0 500 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 KIAA0895Q8NCT3 520 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 TMC2Q8TDI7 906 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 TAF4BQ92750 862 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 ECT2Q9H8V3 914 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 HPSEQ9Y251 543 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 FRMD4BQ9Y2L6 1034 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 DMDP11532 3685 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 A0A1B0GVL5 298 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 ZNF840PA6NDX5 716 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 F8VP50 259 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 K7ESF4 209 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 SLC9A3R1O14745 358 aaPredicted RBP12.13□□□□□ -0.47
VTN-203ENST00000542029 MAPK13O15264 365 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 CALUO43852 315 aaPredicted RBP12.13□□□□□ -0.47
VTN-203ENST00000542029 FOXD2O60548 495 aaPredicted RBP12.13□□□□□ -0.47
VTN-203ENST00000542029 CLSTN1O94985 981 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 RTN3O95197 1032 aaPredicted RBP12.13□□□□□ -0.47
VTN-203ENST00000542029 NFATC1O95644 943 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 C4BPAP04003 597 aaKnown RBP12.13□□□□□ -0.47
VTN-203ENST00000542029 RETP07949 1114 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 SLC7A9P82251 487 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 NCOA4Q13772 614 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 SIM2Q14190 667 aaPredicted RBP12.13□□□□□ -0.47
VTN-203ENST00000542029 SGSM1Q2NKQ1 1148 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 TRIM68Q6AZZ1 485 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 Q6ZS52 159 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
VTN-203ENST00000542029 GRAMD1CQ8IYS0 662 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 STKLD1Q8NE28 680 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 PDZD8Q8NEN9 1154 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 SH3RF2Q8TEC5 729 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 OVCA2Q8WZ82 227 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 CYP2S1Q96SQ9 504 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 P2RY13Q9BPV8 354 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 GZF1Q9H116 711 aaPredicted RBP12.13□□□□□ -0.47
VTN-203ENST00000542029 KCTD10Q9H3F6 313 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 TRAF3IP3Q9Y228 551 aa12.13□□□□□ -0.47
VTN-203ENST00000542029 SPTBN4Q9H254 2564 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 C2orf78A6NCI8 922 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 LRRIQ3A6PVS8 624 aaPredicted RBP12.12□□□□□ -0.47
VTN-203ENST00000542029 CHURC1-FNTBB4DL54 471 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 NR3C1P04150 777 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 ARSAP15289 507 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 RPL13P26373 211 aaKnown RBP12.12□□□□□ -0.47
VTN-203ENST00000542029 GJA4P35212 333 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 FNTBP49356 437 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 CASP4P49662 377 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 ENPEPQ07075 957 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 NFIL3Q16649 462 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 EML3Q32P44 896 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 ZACNQ401N2 412 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 FSTL4Q6MZW2 842 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 PRR23BQ6ZRT6 265 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 DGLUCYQ7Z3D6 616 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 NUP93Q8N1F7 819 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 CAMKK1Q8N5S9 505 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 CD101Q93033 1021 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 ACDQ96AP0 544 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 RMDN1Q96DB5 314 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 SLC22A12Q96S37 553 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 IMPG2Q9BZV3 1241 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 DNAI2Q9GZS0 605 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 COMMD8Q9NX08 183 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 DLL3Q9NYJ7 618 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
VTN-203ENST00000542029 COL4A3Q01955 1670 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 OTOL1A6NHN0 477 aaPredicted RBP12.11□□□□□ -0.47
VTN-203ENST00000542029 RHOBTB3O94955 611 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 OLFM2O95897 454 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 YWHAQP27348 245 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 GALK1P51570 392 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 USP46P62068 366 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 TAF10Q12962 218 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 INTS8Q75QN2 995 aaKnown RBP12.11□□□□□ -0.47
VTN-203ENST00000542029 CEP68Q76N32 757 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 UNC93AQ86WB7 457 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 TTC16Q8NEE8 873 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 RIN3Q8TB24 985 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 PLEKHO2Q8TD55 490 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 SMARCD1Q96GM5 515 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 B3GNT5Q9BYG0 378 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 DPEP3Q9H4B8 488 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 DMAP1Q9NPF5 467 aaPredicted RBP12.11□□□□□ -0.47
VTN-203ENST00000542029 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 WNT6Q9Y6F9 365 aa12.11□□□□□ -0.47
VTN-203ENST00000542029 MIA3Q5JRA6 1907 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms