RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 USP46P62068 366 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 USP4Q13107 963 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 RUNX3Q13761 415 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 PDGFRLQ15198 375 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 ZNF77Q15935 545 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 WDR44Q5JSH3 913 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 CC2D1AQ6P1N0 951 aaPredicted RBP22.33■■□□□ 1.17
CHFR-217ENST00000540537 TSSK4Q6SA08 328 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 SPEM1Q8N4L4 309 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 TAF4BQ92750 862 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 SLC22A12Q96S37 553 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 CYP2S1Q96SQ9 504 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 ZNF518BQ9C0D4 1074 aa22.33■■□□□ 1.17
CHFR-217ENST00000540537 RBM12Q9NTZ6 932 aaKnown RBP22.33■■□□□ 1.17
CHFR-217ENST00000540537 GPR179Q6PRD1 2367 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 HELZP42694 1942 aaKnown RBP22.32■■□□□ 1.16
CHFR-217ENST00000540537 C2orf78A6NCI8 922 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 LILRB5O75023 590 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 TCF3P15923 654 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 NR2F2P24468 414 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 PPP3CCP48454 512 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 NRLP54845 237 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 CDH8P55286 799 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 ENPEPQ07075 957 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 GAS6Q14393 721 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 MTF1Q14872 753 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 PON2Q15165 354 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 SGSM1Q2NKQ1 1148 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 TRIM68Q6AZZ1 485 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 SCARA5Q6ZMJ2 495 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 SV2AQ7L0J3 742 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 SYNPOQ8N3V7 929 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 ARL14EPQ8N8R7 260 aaPredicted RBP22.32■■□□□ 1.16
CHFR-217ENST00000540537 B3GNT5Q9BYG0 378 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 EBF3Q9H4W6 596 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 TRPM5Q9NZQ8 1165 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 SPTBN4Q9H254 2564 aa22.32■■□□□ 1.16
CHFR-217ENST00000540537 ATP8B3O60423 1300 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 RPL13P26373 211 aaKnown RBP22.31■■□□□ 1.16
CHFR-217ENST00000540537 RAP1GAPP47736 663 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 CXCL12P48061 93 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 VAMP7P51809 220 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 CACNA2D1P54289 1103 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 NUCB2P80303 420 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 CCINQ13939 588 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 C1orf220Q5T0J3 134 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 INTS8Q75QN2 995 aaKnown RBP22.31■■□□□ 1.16
CHFR-217ENST00000540537 SUMF1Q8NBK3 374 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 TNIP3Q96KP6 325 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 TMEM30AQ9NV96 361 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 ARHGAP26Q9UNA1 814 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 MAPK8IP1Q9UQF2 711 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 FRYLO94915 3013 aa22.31■■□□□ 1.16
CHFR-217ENST00000540537 CLDN5O00501 218 aa22.3■■□□□ 1.16
CHFR-217ENST00000540537 AKAP3O75969 853 aa22.3■■□□□ 1.16
CHFR-217ENST00000540537 PAPSS2O95340 614 aaPredicted RBP22.3■■□□□ 1.16
CHFR-217ENST00000540537 ASS1P00966 412 aaKnown RBP22.3■■□□□ 1.16
CHFR-217ENST00000540537 HDCP19113 662 aa22.3■■□□□ 1.16
CHFR-217ENST00000540537 AMPD2Q01433 879 aa22.3■■□□□ 1.16
CHFR-217ENST00000540537 OSCP1Q8WVF1 389 aa22.3■■□□□ 1.16
CHFR-217ENST00000540537 SDCBP2Q9H190 292 aa22.3■■□□□ 1.16
CHFR-217ENST00000540537 ZNF840PA6NDX5 716 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 OTOL1A6NHN0 477 aaPredicted RBP22.29■■□□□ 1.16
CHFR-217ENST00000540537 TRDMT1O14717 391 aaKnown RBP22.29■■□□□ 1.16
CHFR-217ENST00000540537 HLA-DRAP01903 254 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 KRT13P13646 458 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 ARSAP15289 507 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 PIK3CAP42336 1068 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 SATB1Q01826 763 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 ZCWPW2Q504Y3 356 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 TMEM196Q5HYL7 178 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 Q6ZS52 159 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 FAM35AQ86V20 835 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 FAM186BQ8IYM0 893 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 FMR1NBQ8N0W7 255 aaPredicted RBP22.29■■□□□ 1.16
CHFR-217ENST00000540537 CPA6Q8N4T0 437 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 SH3RF2Q8TEC5 729 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 RUBCNQ92622 972 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 ELMO3Q96BJ8 720 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 EPC1Q9H2F5 836 aa22.29■■□□□ 1.16
CHFR-217ENST00000540537 DUS2Q9NX74 493 aaKnown RBP22.29■■□□□ 1.16
CHFR-217ENST00000540537 RTN3O95197 1032 aaPredicted RBP22.28■■□□□ 1.16
CHFR-217ENST00000540537 PSMC2P35998 433 aaKnown RBP22.28■■□□□ 1.16
CHFR-217ENST00000540537 IFNAR2P48551 515 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 ADAM9Q13443 819 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 EDRF1Q3B7T1 1238 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 UNC93AQ86WB7 457 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 NUP93Q8N1F7 819 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 ATP2A3Q93084 1043 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 CHFRQ96EP1 664 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 SLITRK1Q96PX8 696 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 MED10Q9BTT4 135 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 ECT2Q9H8V3 914 aa22.28■■□□□ 1.16
CHFR-217ENST00000540537 GOLGA6L4A6NEF3 574 aa22.27■■□□□ 1.16
CHFR-217ENST00000540537 OLFM2O95897 454 aa22.27■■□□□ 1.16
CHFR-217ENST00000540537 TRIM49P0CI25 452 aa22.27■■□□□ 1.16
CHFR-217ENST00000540537 TRIM49CP0CI26 452 aa22.27■■□□□ 1.16
CHFR-217ENST00000540537 ASPAP45381 313 aa22.27■■□□□ 1.16
CHFR-217ENST00000540537 MCCD1P59942 119 aaPredicted RBP22.27■■□□□ 1.16
CHFR-217ENST00000540537 SLC7A9P82251 487 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms