RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 LRG1P02750 347 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 FOSL2P15408 326 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 GTF2F1P35269 517 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDB1-216ENST00000539739 FMO1Q01740 532 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 PPM1LQ5SGD2 360 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 HGSNATQ68CP4 663 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 CCDC186Q7Z3E2 898 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 CEP295NLQ96MC4 621 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 SMOQ99835 787 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 CSNK1G1Q9HCP0 422 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 DZANK1Q9NVP4 752 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 YIPF1Q9Y548 306 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 INSL5Q9Y5Q6 135 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 XPO1O14980 1071 aaKnown RBP16.3■□□□□ 0.2
DDB1-216ENST00000539739 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
DDB1-216ENST00000539739 GPD2P43304 727 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 EPHB3P54753 998 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 CDK17Q00537 523 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 TWF1Q12792 350 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 KCNC3Q14003 757 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 VEPH1Q14D04 833 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 DDR2Q16832 855 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 PKDCCQ504Y2 493 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 DENND1BQ6P3S1 775 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 WDR59Q6PJI9 974 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 ZNF571Q7Z3V5 609 aaPredicted RBP16.3■□□□□ 0.2
DDB1-216ENST00000539739 PASD1Q8IV76 773 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 ELMOD1Q8N336 334 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 GUCD1Q96NT3 240 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 NOX5Q96PH1 765 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 KCNK16Q96T55 309 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDB1-216ENST00000539739 UBXN6Q9BZV1 441 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 DEF6Q9H4E7 631 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 PNPLA8Q9NP80 782 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 MTMR10Q9NXD2 777 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 ARHGAP20Q9P2F6 1191 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 ZMYND10O75800 440 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 SOAT2O75908 522 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 BEST1O76090 585 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 CFHP08603 1231 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 CHRNB2P17787 502 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 HOXA9P31269 272 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 TAF12Q16514 161 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 TMEM184AQ6ZMB5 413 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 SPATA17Q96L03 361 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 CCDC42Q96M95 316 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 ZDHHC7Q9NXF8 308 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 ASB3Q9Y575 518 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 ATG2AQ2TAZ0 1938 aa16.29■□□□□ 0.2
DDB1-216ENST00000539739 PLEKP08567 350 aaPredicted RBP16.28■□□□□ 0.2
DDB1-216ENST00000539739 HNRNPA1P09651 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDB1-216ENST00000539739 PLA2G4AP47712 749 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 GPR15P49685 360 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 SNX16P57768 344 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
DDB1-216ENST00000539739 ADAM15Q13444 863 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 PPP1R2P3Q6NXS1 205 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 CYP26C1Q6V0L0 522 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 ITIH5Q86UX2 942 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 MSANTD4Q8NCY6 345 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 ZMIZ2Q8NF64 920 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 VN1R2Q8NFZ6 395 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 SLC35F5Q8WV83 523 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 PDLIM2Q96JY6 352 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 HSFY1Q96LI6 401 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 SFXN1Q9H9B4 322 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 TMEM30AQ9NV96 361 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
DDB1-216ENST00000539739 NRDCO43847 1150 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 XYLBO75191 536 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 CYP1A1P04798 512 aaPredicted RBP16.27■□□□□ 0.2
DDB1-216ENST00000539739 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.2
DDB1-216ENST00000539739 CSH1P0DML2 217 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 CSH2P0DML3 217 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 ATF6P18850 670 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 CDH5P33151 784 aaPredicted RBP16.27■□□□□ 0.2
DDB1-216ENST00000539739 EIF4A3P38919 411 aaKnown RBP16.27■□□□□ 0.2
DDB1-216ENST00000539739 ACADSBP45954 432 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 PLXNA3P51805 1871 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 SDHAF4Q5VUM1 108 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 EP400NLQ6ZTU2 488 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 DENND5BQ6ZUT9 1274 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 PIGZQ86VD9 579 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 TMTC1Q8IUR5 882 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 NUP93Q8N1F7 819 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 C1orf131Q8NDD1 294 aaKnown RBP16.27■□□□□ 0.2
DDB1-216ENST00000539739 GIPC2Q8TF65 315 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 ZNF512Q96ME7 567 aaPredicted RBP16.27■□□□□ 0.2
DDB1-216ENST00000539739 CHP1Q99653 195 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 SYT11Q9BT88 431 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
DDB1-216ENST00000539739 LRRC4Q9HBW1 653 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 ST7Q9NRC1 585 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 CLDND1Q9NY35 253 aa16.27■□□□□ 0.2
DDB1-216ENST00000539739 ADAMTS1Q9UHI8 967 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms