RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 IRGCQ6NXR0 463 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 RINLQ6ZS11 566 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 IGDCC3Q8IVU1 814 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 AGBL3Q8NEM8 1001 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 SLC44A1Q8WWI5 657 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 FAM136AQ96C01 138 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 ATG4CQ96DT6 458 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 NIFKQ9BYG3 293 aaKnown RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 LHX5Q9H2C1 402 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 ZWILCHQ9H900 591 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 ALG13Q9NP73 1137 aaKnown RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 NMRK1Q9NWW6 199 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 TAS2R1Q9NYW7 299 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 CNTN3Q9P232 1028 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 COL11A1P12107 1806 aaPredicted RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 SPAG6O75602 509 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 ESRRAP11474 423 aaPredicted RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 CALRP27797 417 aaKnown RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 ELK3P41970 407 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 PSMC4P43686 418 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 EIF3EP60228 445 aaKnown RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 YWHAEP62258 255 aaKnown RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 ZNF200P98182 395 aaPredicted RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 SLC34A1Q06495 639 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 PTK7Q13308 1070 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 RCN1Q15293 331 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 SEZ6Q53EL9 994 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 ACSBG2Q5FVE4 666 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 SNX30Q5VWJ9 437 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 ZPBP2Q6X784 338 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 VPS52Q8N1B4 723 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 CMASQ8NFW8 434 aaPredicted RBP10.11□□□□□ -0.79
CDH13-204ENST00000539548 SERAC1Q96JX3 654 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 SYNCQ9H7C4 482 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 PNPLA8Q9NP80 782 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 ZNF302Q9NR11 478 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 IKBKGQ9Y6K9 419 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 APOC4-APOC2K7ER74 178 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 APOC2P02655 101 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 OATP04181 439 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 PDHA1P08559 390 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 RARBP10826 455 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 BGNP21810 368 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 STIP1P31948 543 aaKnown RBP10.1□□□□□ -0.79
CDH13-204ENST00000539548 FAAP100Q0VG06 881 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 KPNB1Q14974 876 aaKnown RBP10.1□□□□□ -0.79
CDH13-204ENST00000539548 ZRSR2Q15696 482 aaKnown RBP10.1□□□□□ -0.79
CDH13-204ENST00000539548 DUOXA2Q1HG44 320 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 GNPTABQ3T906 1256 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 ZNF394Q53GI3 561 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 DENND1BQ6P3S1 775 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 CCDC62Q6P9F0 684 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 KIAA0319LQ8IZA0 1049 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 FAM71DQ8N9W8 422 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 REPS2Q8NFH8 660 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 JOSD2Q8TAC2 188 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 NRG4Q8WWG1 115 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 MCUR1Q96AQ8 359 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 OXNAD1Q96HP4 312 aaPredicted RBP10.1□□□□□ -0.79
CDH13-204ENST00000539548 WNK4Q96J92 1243 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 FAM111AQ96PZ2 611 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 SYT15Q9BQS2 421 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 YIPF3Q9GZM5 350 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 FBXO6Q9NRD1 293 aaPredicted RBP10.1□□□□□ -0.79
CDH13-204ENST00000539548 SPATS2LQ9NUQ6 558 aaKnown RBP10.1□□□□□ -0.79
CDH13-204ENST00000539548 STX18Q9P2W9 335 aaKnown RBP10.1□□□□□ -0.79
CDH13-204ENST00000539548 CHMP2BQ9UQN3 213 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 LRCH1Q9Y2L9 728 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 TEX264Q9Y6I9 313 aa10.1□□□□□ -0.79
CDH13-204ENST00000539548 RLFQ13129 1914 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 TCRBV9S1A1TA0A576 114 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 EIF4E1BA6NMX2 242 aaKnown RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 A8MXQ7 604 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 WNT10BO00744 389 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 FCHO1O14526 889 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 MCF2LO15068 1137 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 ADCY3O60266 1144 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 FAM189A1O60320 539 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 KRT36O76013 467 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 INHBAP08476 426 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 WEE2P0C1S8 567 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 RBP3P10745 1247 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 PYGBP11216 843 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 NEFHP12036 1026 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 SKIP12755 728 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 RFC5P40937 340 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 TNFSF9P41273 254 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 SERPINB4P48594 390 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 RAP1GDS1P52306 607 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 OAZ1P54368 228 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 MTMR2Q13614 643 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 SURF1Q15526 300 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 SMTNL2Q2TAL5 461 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 KBTBD12Q3ZCT8 623 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 PTPN20Q4JDL3 420 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 KCNT1Q5JUK3 1230 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 WDR78Q5VTH9 848 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 EP400NLQ6ZTU2 488 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 RFX6Q8HWS3 928 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms