RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 MBD1Q9UIS9 605 aaPredicted RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 SLC6A14Q9UN76 642 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 DSPP15924 2871 aaKnown RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 ATXN2Q99700 1313 aaKnown RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 ANTXRLA6NF34 631 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 TISP43B9A030 160 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 SGK1O00141 431 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 LEFTY2O00292 366 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 SLC9A3R1O14745 358 aaPredicted RBP15.12■□□□□ 0.01
PBX3-212ENST00000538998 KAT7O95251 611 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 APODP05090 189 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 SERPINF2P08697 491 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 ITPKAP23677 461 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 POLR2BP30876 1174 aaKnown RBP15.12■□□□□ 0.01
PBX3-212ENST00000538998 TIE1P35590 1138 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 MAGEA11P43364 429 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 LHX1P48742 406 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 DHX8Q14562 1220 aaKnown RBP15.12■□□□□ 0.01
PBX3-212ENST00000538998 POSTNQ15063 836 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 MAP7D1Q3KQU3 841 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 CRELD2Q6UXH1 353 aaPredicted RBP15.12■□□□□ 0.01
PBX3-212ENST00000538998 C4orf50Q6ZRC1 276 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 FILIP1Q7Z7B0 1213 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 CHCHD4Q8N4Q1 142 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 LRRC52Q8N7C0 313 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 FRMD1Q8N878 549 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 POMGNT1Q8WZA1 660 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 CALML4Q96GE6 196 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 ZSCAN31Q96LW9 406 aaPredicted RBP15.12■□□□□ 0.01
PBX3-212ENST00000538998 AK8Q96MA6 479 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 CEP295NLQ96MC4 621 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 GTPBP2Q9BX10 602 aaKnown RBP15.12■□□□□ 0.01
PBX3-212ENST00000538998 ST6GALNAC4Q9H4F1 302 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 AGAP1Q9UPQ3 857 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 GPSM3Q9Y4H4 160 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 DMXL2Q8TDJ6 3036 aa15.12■□□□□ 0.01
PBX3-212ENST00000538998 TCRBV21S2A2A0A5A6 115 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
PBX3-212ENST00000538998 CAPNS1P04632 268 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 ITGB3P05106 788 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 CHRM1P11229 460 aaPredicted RBP15.11■□□□□ 0.01
PBX3-212ENST00000538998 KIR2DL1P43626 348 aaPredicted RBP15.11■□□□□ 0.01
PBX3-212ENST00000538998 ZXDBP98169 803 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 TFAMQ00059 246 aaKnown RBP15.11■□□□□ 0.01
PBX3-212ENST00000538998 RESTQ13127 1097 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 DHCR24Q15392 516 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 RAB44Q7Z6P3 723 aaPredicted RBP15.11■□□□□ 0.01
PBX3-212ENST00000538998 ADGRF2Q8IZF7 708 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 ADGRG2Q8IZP9 1017 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 PGBD3Q8N328 593 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 TOP6BLQ8N6T0 577 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
PBX3-212ENST00000538998 SPATA17Q96L03 361 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 CAPN10Q9HC96 672 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 GDAP2Q9NXN4 497 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 EHD2Q9NZN4 543 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 TRPM5Q9NZQ8 1165 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 TCHHQ07283 1943 aa15.11■□□□□ 0.01
PBX3-212ENST00000538998 ASCC3Q8N3C0 2202 aaKnown RBP15.11■□□□□ 0.01
PBX3-212ENST00000538998 ITPR1Q14643 2758 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 A0A0A0MRY4 1105 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.1■□□□□ 0.01
PBX3-212ENST00000538998 GABRDO14764 452 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 ADH1CP00326 375 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 GRIA2P42262 883 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 TNFRSF4P43489 277 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 PPP3CCP48454 512 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 SLC7A9P82251 487 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 RPL6Q02878 288 aaKnown RBP15.1■□□□□ 0.01
PBX3-212ENST00000538998 CCDC142Q17RM4 750 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 VSTM1Q6UX27 236 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 SLC36A4Q6YBV0 504 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 SFTPA1Q8IWL2 248 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 MINDY1Q8N5J2 469 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 C1orf127Q8N9H9 656 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 HVCN1Q96D96 273 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 ARHGEF4Q9NR80 690 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 ITGA11Q9UKX5 1188 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 SNX9Q9Y5X1 595 aa15.1■□□□□ 0.01
PBX3-212ENST00000538998 TNRC6BQ9UPQ9 1833 aaKnown RBP15.1■□□□□ 0.01
PBX3-212ENST00000538998 NBEAQ8NFP9 2946 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 ARHGAP33O14559 1287 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 ADAM23O75077 832 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 SEC24BO95487 1268 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 ADSSP30520 456 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 UBA7P41226 1012 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 SLC6A11P48066 632 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 FAM193AP78312 1265 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 MESP2Q0VG99 397 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 SLC14A1Q13336 389 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 MCM6Q14566 821 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 MAPRE1Q15691 268 aaKnown RBP15.09■□□□□ 0.01
PBX3-212ENST00000538998 MCTP1Q6DN14 999 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 FAM171BQ6P995 826 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 DENND5BQ6ZUT9 1274 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 TRMT11Q7Z4G4 463 aaKnown RBP15.09■□□□□ 0.01
PBX3-212ENST00000538998 OSTM1Q86WC4 334 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 DDX42Q86XP3 938 aaKnown RBP eCLIP15.09■□□□□ 0.01
PBX3-212ENST00000538998 BRSK2Q8IWQ3 736 aa15.09■□□□□ 0.01
PBX3-212ENST00000538998 KCNV2Q8TDN2 545 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms