RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 KXD1Q9BQD3 176 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 ATXN3LQ9H3M9 355 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 MYO18AQ92614 2054 aaKnown RBP14.55□□□□□ -0.08
CD9-208ENST00000538834 ATG2BQ96BY7 2078 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 GTPBP10A4D1E9 387 aaKnown RBP14.55□□□□□ -0.08
CD9-208ENST00000538834 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 AFPP02771 609 aaKnown RBP14.55□□□□□ -0.08
CD9-208ENST00000538834 CCDC130P13994 396 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 GRIK1P39086 918 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 VIPR2P41587 438 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 MLLT6P55198 1093 aaPredicted RBP14.55□□□□□ -0.08
CD9-208ENST00000538834 STARD6P59095 220 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 GCNT1Q02742 428 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 WDR44Q5JSH3 913 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 MIIPQ5JXC2 388 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 GPR158Q5T848 1215 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 ARHGAP17Q68EM7 881 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 SCN4BQ8IWT1 228 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 CMTM8Q8IZV2 173 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 ZNF687Q8N1G0 1237 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 FBXL6Q8N531 539 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 CCDC150Q8NCX0 1101 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 ENOX1Q8TC92 643 aaKnown RBP14.55□□□□□ -0.08
CD9-208ENST00000538834 FAM200AQ8TCP9 573 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 SLC2A14Q8TDB8 520 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 DEPDC1BQ8WUY9 529 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 CYFIP2Q96F07 1278 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 CNOT6LQ96LI5 555 aaKnown RBP14.55□□□□□ -0.08
CD9-208ENST00000538834 UBXN6Q9BZV1 441 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 PNPLA8Q9NP80 782 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.55□□□□□ -0.08
CD9-208ENST00000538834 TMEM63CQ9P1W3 806 aa14.55□□□□□ -0.08
CD9-208ENST00000538834 ARIH1Q9Y4X5 557 aaPredicted RBP14.55□□□□□ -0.08
CD9-208ENST00000538834 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.55□□□□□ -0.08
CD9-208ENST00000538834 ZNF840PA6NDX5 716 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 HEPACAM2A8MVW5 462 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 PSMC3P17980 439 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 TBXAS1P24557 533 aaPredicted RBP14.54□□□□□ -0.08
CD9-208ENST00000538834 PPP3CCP48454 512 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 ZNF132P52740 706 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 ORC1Q13415 861 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 PKDCCQ504Y2 493 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 PPP1R26Q5T8A7 1209 aaPredicted RBP14.54□□□□□ -0.08
CD9-208ENST00000538834 CWF19L1Q69YN2 538 aaKnown RBP14.54□□□□□ -0.08
CD9-208ENST00000538834 PHLDB3Q6NSJ2 640 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 NUP93Q8N1F7 819 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 RIN3Q8TB24 985 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 OVCA2Q8WZ82 227 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 DNASE1L2Q92874 299 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 JAKMIP2Q96AA8 810 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 PBXIP1Q96AQ6 731 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 TMEM176AQ96HP8 235 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 KREMEN1Q96MU8 473 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 SLC22A12Q96S37 553 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 DMAP1Q9NPF5 467 aaPredicted RBP14.54□□□□□ -0.08
CD9-208ENST00000538834 DACH1Q9UI36 760 aa14.54□□□□□ -0.08
CD9-208ENST00000538834 ATP8B3O60423 1300 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 RNF225M0QZC1 329 aaPredicted RBP14.53□□□□□ -0.08
CD9-208ENST00000538834 RTN3O95197 1032 aaPredicted RBP14.53□□□□□ -0.08
CD9-208ENST00000538834 OAS1P00973 400 aaKnown RBP14.53□□□□□ -0.08
CD9-208ENST00000538834 CD58P19256 250 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 CLCN5P51795 746 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 ZXDBP98169 803 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 ARHGAP15Q53QZ3 475 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 CDKAL1Q5VV42 579 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 TXNDC8Q6A555 127 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 ARHGEF19Q8IW93 802 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 ZNF276Q8N554 614 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 KIAA1958Q8N8K9 716 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 KAT5Q92993 513 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 USP13Q92995 863 aaPredicted RBP14.53□□□□□ -0.08
CD9-208ENST00000538834 DUSP16Q9BY84 665 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 SAMSN1Q9NSI8 373 aaKnown RBP14.53□□□□□ -0.08
CD9-208ENST00000538834 FAM49BQ9NUQ9 324 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 EHD2Q9NZN4 543 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 MAGED2Q9UNF1 606 aaPredicted RBP14.53□□□□□ -0.08
CD9-208ENST00000538834 USP3Q9Y6I4 520 aa14.53□□□□□ -0.08
CD9-208ENST00000538834 CHADO15335 359 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 AP1G2O75843 785 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 CFHP08603 1231 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 PRKCSHP14314 528 aaPredicted RBP14.52□□□□□ -0.09
CD9-208ENST00000538834 FZD5Q13467 585 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 MAN2A1Q16706 1144 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 RAB41Q5JT25 222 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 CCDC183Q5T5S1 534 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 CELF5Q8N6W0 485 aaKnown RBP14.52□□□□□ -0.09
CD9-208ENST00000538834 MAB21L3Q8N8X9 362 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 SCAMP5Q8TAC9 235 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 MRPS31Q92665 395 aaKnown RBP14.52□□□□□ -0.09
CD9-208ENST00000538834 NT5C1BQ96P26 610 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 FAM83CQ9BQN1 747 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 ZSWIM1Q9BR11 485 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 TRMT61BQ9BVS5 477 aaKnown RBP14.52□□□□□ -0.09
CD9-208ENST00000538834 RNF38Q9H0F5 515 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 INTS2Q9H0H0 1204 aaKnown RBP14.52□□□□□ -0.09
CD9-208ENST00000538834 KCNH6Q9H252 994 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 HSD3B7Q9H2F3 369 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 SIX2Q9NPC8 291 aa14.52□□□□□ -0.09
CD9-208ENST00000538834 KRT82Q9NSB4 513 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms