RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 BTBD8Q5XKL5 378 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 ELMOD1Q8N336 334 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 EXD1Q8NHP7 514 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 ENKURQ8TC29 256 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 SH3RF3Q8TEJ3 882 aaPredicted RBP7.17□□□□□ -1.26
SORT1-209ENST00000538502 PPP1R36Q96LQ0 422 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 PRDM16Q9HAZ2 1276 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 GJB4Q9NTQ9 266 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 TMCC3Q9ULS5 477 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 TMCO1Q9UM00 188 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 SHOC2Q9UQ13 582 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 AAR2Q9Y312 384 aaKnown RBP7.17□□□□□ -1.26
SORT1-209ENST00000538502 GSG1L2A8MUP6 293 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 PDGFRAP16234 1089 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 YWHABP31946 246 aaKnown RBP7.17□□□□□ -1.26
SORT1-209ENST00000538502 RFC5P40937 340 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 CRKP46108 304 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 RIPPLY1Q0D2K3 151 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 ATP1A4Q13733 1029 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 SLC45A4Q5BKX6 768 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 TFDP3Q5H9I0 405 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 SPANXN2Q5MJ10 180 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 TRIM65Q6PJ69 517 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 CCDC149Q6ZUS6 474 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 TDRD5Q8NAT2 981 aaKnown RBP7.17□□□□□ -1.26
SORT1-209ENST00000538502 NEDD1Q8NHV4 660 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 RORBQ92753 470 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 APOPT1Q96IL0 206 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 SPATA16Q9BXB7 569 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 PIGUQ9H490 435 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 C17orf75Q9HAS0 396 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 DCP1AQ9NPI6 582 aaPredicted RBP7.17□□□□□ -1.26
SORT1-209ENST00000538502 KRT84Q9NSB2 600 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 TMEM260Q9NX78 707 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 STK39Q9UEW8 545 aa7.17□□□□□ -1.26
SORT1-209ENST00000538502 FNDC3AQ9Y2H6 1198 aaKnown RBP7.17□□□□□ -1.26
SORT1-209ENST00000538502 LRRC7Q96NW7 1537 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 SDR42E2A6NKP2 422 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 EXTL3O43909 919 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 DGAT1O75907 488 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 ABCB1P08183 1280 aaPredicted RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 ATP6V1C1P21283 382 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 RAB25P57735 213 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 ZNF846Q147U1 533 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 ARHGEF6Q15052 776 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 SDE2Q6IQ49 451 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 AAGABQ6PD74 315 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 ZNF662Q6ZS27 426 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 TMEM26Q6ZUK4 368 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 MARK2Q7KZI7 788 aaKnown RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 NLGN1Q8N2Q7 840 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 AADATQ8N5Z0 425 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 TINF2Q9BSI4 451 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 WDR12Q9GZL7 423 aaKnown RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 RNPEPQ9H4A4 650 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 SERHL2Q9H4I8 314 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 SERHLQ9NQF3 203 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 NAGPAQ9UK23 515 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 DMTF1Q9Y222 760 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 SPHKAPQ2M3C7 1700 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 GDF11O95390 407 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 MLNP12872 115 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 EIF2AK2P19525 551 aaKnown RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 SERPINB5P36952 375 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 CNTN1Q12860 1018 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 GTF2H3Q13889 308 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 SNRNP35Q16560 246 aaKnown RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 C2CD6Q53TS8 623 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 TBCELQ5QJ74 424 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 GRTP1Q5TC63 336 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 KIAA1841Q6NSI8 718 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 RDM1Q8NG50 284 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 OR6Y1Q8NGX8 325 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 IGDCC4Q8TDY8 1250 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 CPA5Q8WXQ8 436 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 USP13Q92995 863 aaPredicted RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 ATXN7L3BQ96GX2 97 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 DEPDC7Q96QD5 511 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 PAFAH2Q99487 392 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 HOXC10Q9NYD6 342 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 PNMA3Q9UL41 463 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 SF3B1O75533 1304 aaKnown RBP eCLIP7.16□□□□□ -1.263e-6■■■■■ 124.8
SORT1-209ENST00000538502 C1orf232A0A0U1RR37 186 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 FAM20BO75063 409 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 SERPINE1P05121 402 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 FBXW4P57775 412 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 HPCAP84074 193 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 OTUD4Q01804 1114 aaKnown RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 PRKAA1Q13131 559 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 DOK7Q18PE1 504 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 TBC1D10BQ4KMP7 808 aaPredicted RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 TMC3Q7Z5M5 1100 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 RMDN3Q96TC7 470 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 PLA2G12BQ9BX93 195 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 A1CFQ9NQ94 594 aaKnown RBP7.16□□□□□ -1.26
SORT1-209ENST00000538502 CIDEBQ9UHD4 219 aa7.16□□□□□ -1.26
SORT1-209ENST00000538502 DNAJC16Q9Y2G8 782 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms