RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 PRELID2Q8N945 189 aa22.06■■□□□ 1.12
PDXDC1-205ENST00000535621 TBC1D13Q9NVG8 400 aa22.06■■□□□ 1.12
PDXDC1-205ENST00000535621 AMACRQ9UHK6 382 aa22.06■■□□□ 1.12
PDXDC1-205ENST00000535621 TSC2P49815 1807 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 FSCN2O14926 492 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 PAPSS1O43252 624 aaPredicted RBP22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 TIMP1P01033 207 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 ACRP10323 421 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 ODC1P11926 461 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 PAX3P23760 479 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 SNX16P57768 344 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 SIX1Q15475 284 aaPredicted RBP22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 NOMO2Q5JPE7 1267 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 PAQR9Q6ZVX9 377 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 SCUBE3Q8IX30 993 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 EXD1Q8NHP7 514 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 PLEKHA4Q9H4M7 779 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 CRTAC1Q9NQ79 661 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 CYLDQ9NQC7 956 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 DNAJB4Q9UDY4 337 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 PCDHB7Q9Y5E2 793 aa22.05■■□□□ 1.12
PDXDC1-205ENST00000535621 ZSCAN5CA6NGD5 496 aaPredicted RBP22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 M0QZQ0 153 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 LRCH4O75427 683 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 MYBL2P10244 700 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 GJC1P36383 396 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 BRCC3P46736 316 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 PLA2G4AP47712 749 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 DSC1Q08554 894 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 ATP13A4Q4VNC1 1196 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 DCLRE1AQ6PJP8 1040 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 ZDHHC17Q8IUH5 632 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 DUSP16Q9BY84 665 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 B3GNT5Q9BYG0 378 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 GDF3Q9NR23 364 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 C2CD4BA6NLJ0 364 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 KIAA0355O15063 1070 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 CAPN15O75808 1086 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 UPP2O95045 317 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 CYP11A1P05108 521 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 RAG1P15918 1043 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 SLC6A3Q01959 620 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 LLGL1Q15334 1064 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 MDH1BQ5I0G3 518 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 TXNRD3NBQ6F5E7 133 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 TRNP1Q6NT89 227 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 SYT15Q9BQS2 421 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 ELAC1Q9H777 363 aaKnown RBP22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 PTPRSQ13332 1948 aa22.04■■□□□ 1.12
PDXDC1-205ENST00000535621 CLDN5O00501 218 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 RARAP10276 462 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 TNFRSF8P28908 595 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 ZNF143P52747 638 aaPredicted RBP22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 PLCB3Q01970 1234 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 GUCY2DQ02846 1103 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 SLC25A11Q02978 314 aaKnown RBP22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 ACAP1Q15027 740 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 MAATS1Q7Z4T9 603 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 CCDC26Q8TAB7 109 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 SPATA18Q8TC71 538 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 URGCPQ8TCY9 931 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 RSPH1Q8WYR4 309 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 KHSRPQ92945 711 aaKnown RBP eCLIP22.03■■□□□ 1.125e-7■■■■■ 29.9
PDXDC1-205ENST00000535621 HSFY1Q96LI6 401 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 CASD1Q96PB1 797 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 RTP3Q9BQQ7 232 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 HERPUD2Q9BSE4 406 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 EPB41L5Q9HCM4 733 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 CDH9Q9ULB4 789 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 MTUS1Q9ULD2 1270 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 LRFN2Q9ULH4 789 aa22.03■■□□□ 1.12
PDXDC1-205ENST00000535621 XPO1O14980 1071 aaKnown RBP22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 PHF2O75151 1096 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 FLT3P36888 993 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 TAF5Q15542 800 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 CYP1B1Q16678 543 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 POLNQ7Z5Q5 900 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 CCDC50Q8IVM0 306 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 IFT20Q8IY31 132 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 KANSL3Q9P2N6 904 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 MYBPHLA2RUH7 354 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 GRAP2O75791 330 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 PARNO95453 639 aaKnown RBP22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 NPR3P17342 541 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 GPD1P21695 349 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 CNKSR3Q6P9H4 555 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 FAM43BQ6ZT52 329 aaPredicted RBP22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 ANKS1BQ7Z6G8 1248 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 GSPT2Q8IYD1 628 aaKnown RBP22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 RCOR2Q8IZ40 523 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 RXFP2Q8WXD0 754 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 SUSD3Q96L08 255 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 KLHL11Q9NVR0 708 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 COL4A6Q14031 1691 aa22.02■■□□□ 1.12
PDXDC1-205ENST00000535621 ESYT3A0FGR9 886 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 BEST1O76090 585 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 RALAP11233 206 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 PDGFRAP16234 1089 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 PCSK1P29120 753 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 CHRNA3P32297 505 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms