RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 RAB6BQ9NRW1 208 aa14.55□□□□□ -0.08
LPCAT3-203ENST00000535479 TAS2R1Q9NYW7 299 aa14.55□□□□□ -0.08
LPCAT3-203ENST00000535479 COX16Q9P0S2 106 aa14.55□□□□□ -0.08
LPCAT3-203ENST00000535479 IP6K2Q9UHH9 426 aa14.55□□□□□ -0.08
LPCAT3-203ENST00000535479 MFHAS1Q9Y4C4 1052 aa14.55□□□□□ -0.08
LPCAT3-203ENST00000535479 TCRBV9S1A1TA0A576 114 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 B2RBV5 119 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 KIF1CO43896 1103 aaKnown RBP14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 PDE5AO76074 875 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 APRTP07741 180 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 ASNSP08243 561 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 KRT3P12035 628 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 AMHR2Q16671 573 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 C4orf50Q6ZRC1 276 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 C15orf39Q6ZRI6 1047 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 C12orf29Q8N999 325 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 DCAKDQ8WVC6 231 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 KCNK13Q9HB14 408 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 AVENQ9NQS1 362 aaPredicted RBP14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 GINS2Q9Y248 185 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 IKBKGQ9Y6K9 419 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 LTBP1Q14766 1721 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 VWA5AO00534 786 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 FCHO1O14526 889 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 ALOX15BO15296 676 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 ERBB2P04626 1255 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 POTEJP0CG39 1038 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 RASSF2P50749 326 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 TRPC3Q13507 836 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 MYBPC2Q14324 1141 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 VWA5B1Q5TIE3 1220 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 CCHCR1Q8TD31 782 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 PRPF31Q8WWY3 499 aaKnown RBP14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 PEBP4Q96S96 227 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 IWS1Q96ST2 819 aa14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
LPCAT3-203ENST00000535479 LOC100653049A0A140TA62 436 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 NVLO15381 856 aaKnown RBP14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 GSC2O15499 205 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 DCTN3O75935 186 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 KRT34O76011 436 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 TFE3P19532 575 aaPredicted RBP14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 NUMBP49757 651 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 EPHB1P54762 984 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 KRT76Q01546 638 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 CAPSQ13938 189 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 RCOR2Q8IZ40 523 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 ZNF276Q8N554 614 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 CXCL16Q9H2A7 254 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 AFG3L2Q9Y4W6 797 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 COL11A2P13942 1736 aaPredicted RBP14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 TROVE2P10155 538 aaKnown RBP eCLIP14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 CDH6P55285 790 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 SLC8A3P57103 927 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 TMPRSS15P98073 1019 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 CAV1Q03135 178 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 PSMD6Q15008 389 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 GJC2Q5T442 439 aaPredicted RBP14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 CFAP61Q8NHU2 1237 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 PYDC1Q8WXC3 89 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 FAF2Q96CS3 445 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 APOL6Q9BWW8 343 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 UNKQ9C0B0 810 aaKnown RBP14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 SMYD2Q9NRG4 433 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 ARHGAP28Q9P2N2 729 aa14.53□□□□□ -0.08
LPCAT3-203ENST00000535479 ATP2A1O14983 1001 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 KCNN4O15554 427 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 INHBAP08476 426 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 CXCL8P10145 99 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 PTPN4P29074 926 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 MIPP30301 263 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 HSPA1LP34931 641 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 JAK3P52333 1124 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 RABGGTBP53611 331 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 SLC25A3Q00325 362 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 TCEAL1Q15170 157 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 CHI3L2Q15782 390 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 LY6KQ17RY6 165 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 HSF5Q4G112 596 aaPredicted RBP14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 EEF1DP3Q658K8 133 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 VSIG10LQ86VR7 867 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 MCF2L2Q86YR7 1114 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 SAMD3Q8N6K7 520 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 RNF149Q8NC42 400 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 MAIP1Q8WWC4 291 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 TRIM55Q9BYV6 548 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 IMPG2Q9BZV3 1241 aa14.52□□□□□ -0.08
LPCAT3-203ENST00000535479 INO80B-WBP1J3KQ70 363 aa14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 TOM1L1O75674 476 aa14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 ADORA2AP29274 412 aa14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 MAN1A1P33908 653 aa14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 PGM1P36871 562 aa14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 TMEM132BQ14DG7 1078 aa14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 RASA2Q15283 850 aa14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 FAM102AQ5T9C2 384 aaPredicted RBP14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 WDR78Q5VTH9 848 aa14.52□□□□□ -0.09
LPCAT3-203ENST00000535479 FOXB2Q5VYV0 432 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms