RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 NDUFV2P19404 249 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 TARDBPQ13148 414 aaKnown RBP eCLIP11.57□□□□□ -0.56
VAMP1-204ENST00000535180 ZC2HC1CQ53FD0 456 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-204ENST00000535180 GALNT17Q6IS24 598 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 ZNF574Q6ZN55 896 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-204ENST00000535180 ZNF513Q8N8E2 541 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-204ENST00000535180 ARL14EPQ8N8R7 260 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-204ENST00000535180 LRRC15Q8TF66 581 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 LGMNQ99538 433 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 CPNE5Q9HCH3 593 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 ARHGEF4Q9NR80 690 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 KCNK4Q9NYG8 393 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 GCNT4Q9P109 453 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 UXTQ9UBK9 157 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-204ENST00000535180 PCDHGA1Q9Y5H4 931 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 MYH11P35749 1972 aa11.57□□□□□ -0.56
VAMP1-204ENST00000535180 UTP20O75691 2785 aaKnown RBP11.56□□□□□ -0.56
VAMP1-204ENST00000535180 A0A1W2PQF6 199 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 MEI4A8MW99 385 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 ABLIM1O14639 778 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 IGHDP01880 384 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 ODC1P11926 461 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 CYP11B2P19099 503 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 PROZP22891 400 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 RESTQ13127 1097 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 DHCR24Q15392 516 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 TBC1D25Q3MII6 688 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 BROXQ5VW32 411 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 LRRTM3Q86VH5 581 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 C12orf40Q86WS4 652 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 PHTF2Q8N3S3 785 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 SNRNP27Q8WVK2 155 aaKnown RBP11.56□□□□□ -0.56
VAMP1-204ENST00000535180 TRMT2BQ96GJ1 504 aaKnown RBP11.56□□□□□ -0.56
VAMP1-204ENST00000535180 IFT74Q96LB3 600 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 NAP1L4Q99733 375 aaKnown RBP11.56□□□□□ -0.56
VAMP1-204ENST00000535180 MIR1-1HGQ9H1L0 117 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 CD248Q9HCU0 757 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 PCDHA12Q9UN75 941 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 ARHGAP26Q9UNA1 814 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.56□□□□□ -0.56
VAMP1-204ENST00000535180 HEMK1Q9Y5R4 338 aaPredicted RBP11.56□□□□□ -0.56
VAMP1-204ENST00000535180 RELNP78509 3460 aa11.56□□□□□ -0.56
VAMP1-204ENST00000535180 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-204ENST00000535180 PCDHGA12O60330 932 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 C1SP09871 688 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 KRT10P13645 584 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 HDCP19113 662 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 CYP3A5P20815 502 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 CD6P30203 668 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 NTSR1P30989 418 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 CLDN6P56747 220 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 LILRA4P59901 499 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 KDSRQ06136 332 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 SERINC3Q13530 473 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 SF3A1Q15459 793 aaKnown RBP11.55□□□□□ -0.56
VAMP1-204ENST00000535180 ZBTB6Q15916 424 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 FILIP1Q7Z7B0 1213 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 FAM177A1Q8N128 213 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-204ENST00000535180 KIAA1958Q8N8K9 716 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 ZNF248Q8NDW4 579 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 STKLD1Q8NE28 680 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 CADM4Q8NFZ8 388 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 IPO4Q8TEX9 1081 aaKnown RBP11.55□□□□□ -0.56
VAMP1-204ENST00000535180 SENP8Q96LD8 212 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 MYRFLQ96LU7 910 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 TCHPQ9BT92 498 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 CD93Q9NPY3 652 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 ABI2Q9NYB9 513 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-204ENST00000535180 FTSJ1Q9UET6 329 aa11.55□□□□□ -0.56
VAMP1-204ENST00000535180 A0A1B0GVT2 93 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 C2orf78A6NCI8 922 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 TBC1D3BA6NDS4 549 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 TRIM66O15016 1216 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 NOL4O94818 638 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 CYP11A1P05108 521 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 NFICP08651 508 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 NCAM1P13591 858 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 ZXDBP98169 803 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 SPAG1Q07617 926 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 KCNB1Q14721 858 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 ADCK5Q3MIX3 580 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 RHBDF2Q6PJF5 856 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 MPZL3Q6UWV2 235 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 USP49Q70CQ1 688 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 C1orf216Q8TAB5 229 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 TARS2Q9BW92 718 aaKnown RBP11.54□□□□□ -0.56
VAMP1-204ENST00000535180 MRPL4Q9BYD3 311 aaKnown RBP11.54□□□□□ -0.56
VAMP1-204ENST00000535180 PLEKHA5Q9HAU0 1116 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 WSB2Q9NYS7 404 aaPredicted RBP11.54□□□□□ -0.56
VAMP1-204ENST00000535180 HCN2Q9UL51 889 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 UBQLN1Q9UMX0 589 aaKnown RBP11.54□□□□□ -0.56
VAMP1-204ENST00000535180 NUMA1Q14980 2115 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 PHLPP2Q6ZVD8 1323 aa11.54□□□□□ -0.56
VAMP1-204ENST00000535180 ARID1BQ8NFD5 2236 aaPredicted RBP11.54□□□□□ -0.56
VAMP1-204ENST00000535180 CACNA1DQ01668 2161 aa11.53□□□□□ -0.56
VAMP1-204ENST00000535180 METTL12A8MUP2 240 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms